RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, human

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-204	ENST00000507197	HESX1	Q9UBX0	185 aa		13.46	□□□□□ -0.25
SNHG4-204	ENST00000507197	AGO1	Q9UL18	857 aa	Known RBP	13.46	□□□□□ -0.25
SNHG4-204	ENST00000507197	WASF3	Q9UPY6	502 aa		13.46	□□□□□ -0.25
SNHG4-204	ENST00000507197	PLXND1	Q9Y4D7	1925 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	SLC12A8	A0AV02	714 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	SLC16A3	O15427	465 aa	Known RBP	13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	ZBED1	O96006	694 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	KLKB1	P03952	638 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	ACADM	P11310	421 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	TKTL1	P51854	596 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	RAD23B	P54727	409 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	SIM1	P81133	766 aa	Predicted RBP	13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	PLEKHG6	Q3KR16	790 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	MPPE1	Q53F39	396 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	SGO2	Q562F6	1265 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	TCERG1L	Q5VWI1	586 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	PM20D1	Q6GTS8	502 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	PIP4P1	Q86T03	277 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	SLC41A1	Q8IVJ1	513 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	KDF1	Q8NAX2	398 aa	Predicted RBP	13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	CADM4	Q8NFZ8	388 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	RNF139	Q8WU17	664 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	SEMA4D	Q92854	862 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	IPO9	Q96P70	1041 aa	Known RBP	13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	SCNM1	Q9BWG6	230 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	LRRC4	Q9HBW1	653 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	DNAAF2	Q9NVR5	837 aa	Known RBP	13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	KIAA1257	Q9ULG3	409 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	NEUROG3	Q9Y4Z2	214 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	ZFHX4	Q86UP3	3567 aa		13.45	□□□□□ -0.26
SNHG4-204	ENST00000507197	CEP295	Q9C0D2	2601 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	MYOF	Q9NZM1	2061 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	GOLGA6L4	A6NEF3	574 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	MEI4	A8MW99	385 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	C1QTNF9B	B2RNN3	333 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	WASH3P	C4AMC7	463 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	XPO1	O14980	1071 aa	Known RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	SMC2	O95347	1197 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	C1QTNF9	P0C862	333 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	TBXAS1	P24557	533 aa	Predicted RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	FKBP3	Q00688	224 aa	Known RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	BST2	Q10589	180 aa	Known RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	ENPP2	Q13822	863 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	GEN1	Q17RS7	908 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	ZNF423	Q2M1K9	1284 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	FUT11	Q495W5	492 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	COBLL1	Q53SF7	1204 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	TMPRSS6	Q8IU80	811 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	PRCC	Q92733	491 aa	Predicted RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	SIPA1	Q96FS4	1042 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	TOE1	Q96GM8	510 aa	Known RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	PIWIL1	Q96J94	861 aa	Known RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	GSDMA	Q96QA5	445 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	CIPC	Q9C0C6	399 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	ITM2C	Q9NQX7	267 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	ELOVL2	Q9NXB9	296 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	WSB2	Q9NYS7	404 aa	Predicted RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	USP36	Q9P275	1121 aa	Known RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	HOOK1	Q9UJC3	728 aa	Known RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	TSPAN16	Q9UKR8	245 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	ZDHHC9	Q9Y397	364 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	COQ4	Q9Y3A0	265 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	HBS1L	Q9Y450	684 aa	Known RBP	13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	PCDHB9	Q9Y5E1	797 aa		13.44	□□□□□ -0.26
SNHG4-204	ENST00000507197	USP24	Q9UPU5	2620 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197		A0A1B0GTW7	788 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	LATS1	O95835	1130 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	SETSIP	P0DME0	302 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	NCAM1	P13591	858 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	CD19	P15391	556 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	IL12RB1	P42701	662 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	LRRC63	Q05C16	580 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	PDE4C	Q08493	712 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	CUL2	Q13617	745 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	TRIP4	Q15650	581 aa	Predicted RBP	13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	GOLGA7B	Q2TAP0	167 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	SERPINA13P	Q6UXR4	307 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	FAM217A	Q8IXS0	508 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	SIX6OS1	Q8N1H7	587 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	ZNF557	Q8N988	423 aa	Predicted RBP	13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	WFIKKN2	Q8TEU8	576 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	TATDN2	Q93075	761 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	ERLEC1	Q96DZ1	483 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	EEF2KMT	Q96G04	330 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	ARID3A	Q99856	593 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	NUP58	Q9BVL2	599 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	ULBP1	Q9BZM6	244 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	MKRN2	Q9H000	416 aa	Known RBP	13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	GOLPH3L	Q9H4A5	285 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	ABCC13	Q9NSE7	274 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	ZMIZ1	Q9ULJ6	1067 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	PLA2G4C	Q9UP65	541 aa		13.43	□□□□□ -0.26
SNHG4-204	ENST00000507197	MYH10	P35580	1976 aa		13.42	□□□□□ -0.26
SNHG4-204	ENST00000507197	SPAAR	A0A1B0GVQ0	90 aa		13.42	□□□□□ -0.26
SNHG4-204	ENST00000507197	EPHX1	P07099	455 aa		13.42	□□□□□ -0.26
SNHG4-204	ENST00000507197	VDR	P11473	427 aa		13.42	□□□□□ -0.26
SNHG4-204	ENST00000507197	SPINK2	P20155	84 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms