RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	LCP1	P13796	627 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	P2RY2	P41231	377 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	ZNF132	P52740	706 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	STX17	P56962	302 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	ARID5A	Q03989	594 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	MESP2	Q0VG99	397 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	STARD3	Q14849	445 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	SF3A2	Q15428	464 aa	Known RBP	10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	CCDC6	Q16204	474 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	CNGA2	Q16280	664 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	TPD52L1	Q16890	204 aa	Predicted RBP	10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	PLA2G2C	Q5R387	149 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	SLC36A4	Q6YBV0	504 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	ENOSF1	Q7L5Y1	443 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	CREBRF	Q8IUR6	639 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	DENND1C	Q8IV53	801 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	SFTPA1	Q8IWL2	248 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	TRIM59	Q8IWR1	403 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	CPXM2	Q8N436	756 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	EHBP1	Q8NDI1	1231 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	OLIG1	Q8TAK6	271 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	UBA3	Q8TBC4	463 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	DDI1	Q8WTU0	396 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	IRGQ	Q8WZA9	623 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	BHMT	Q93088	406 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	TRIM62	Q9BVG3	475 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	PLK2	Q9NYY3	685 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	INVS	Q9Y283	1065 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	SLC27A6	Q9Y2P4	619 aa		10.9	□□□□□ -0.67
NR1I3-222	ENST00000506018	MED19	A0JLT2	244 aa	Predicted RBP	10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	KHNYN	O15037	678 aa	Known RBP	10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	SART1	O43290	800 aa	Known RBP	10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	MED7	O43513	233 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	LATS1	O95835	1130 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	PENK	P01210	267 aa	Predicted RBP	10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	KRT5	P13647	590 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	EIF4H	Q15056	248 aa	Known RBP	10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	ZSCAN23	Q3MJ62	389 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	MPPE1	Q53F39	396 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	BSPRY	Q5W0U4	402 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	EGFLAM	Q63HQ2	1017 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	RNF43	Q68DV7	783 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	RRAGA	Q7L523	313 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	ANKS1B	Q7Z6G8	1248 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	FMNL3	Q8IVF7	1028 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	UNC45B	Q8IWX7	931 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	UBR7	Q8N806	425 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	ZNF557	Q8N988	423 aa	Predicted RBP	10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	HSFY1	Q96LI6	401 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	SLC2A11	Q9BYW1	496 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	ZDHHC4	Q9NPG8	344 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	DACH1	Q9UI36	760 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	RWDD2A	Q9UIY3	292 aa		10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	AGO1	Q9UL18	857 aa	Known RBP	10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
NR1I3-222	ENST00000506018	DNAH14	Q0VDD8	3507 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	TYW5	A2RUC4	315 aa	Known RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	TULP2	O00295	520 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	TIMM44	O43615	452 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	GDF9	O60383	454 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	KLKB1	P03952	638 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	CISD3	P0C7P0	127 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	BMP6	P22004	513 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	BRD2	P25440	801 aa	Known RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	WAS	P42768	502 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	ACADSB	P45954	432 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	MFAP3	P55082	362 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	DAOA	P59103	153 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	TRIP4	Q15650	581 aa	Predicted RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	GON4L	Q3T8J9	2241 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	PKDCC	Q504Y2	493 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	PPM1J	Q5JR12	505 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	STPG1	Q5TH74	334 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	DAB2IP	Q5VWQ8	1189 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	FYB2	Q5VWT5	728 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	LYSMD4	Q5XG99	296 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	NUGGC	Q68CJ6	796 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	RBM43	Q6ZSC3	357 aa	Known RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	TOGARAM2	Q6ZUX3	1019 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	RABEPK	Q7Z6M1	372 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	CCDC117	Q8IWD4	279 aa	Predicted RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	FAM114A1	Q8IWE2	563 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	IPO4	Q8TEX9	1081 aa	Known RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	SLC35F5	Q8WV83	523 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	EDEM1	Q92611	657 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	GABRG3	Q99928	467 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	DDX50	Q9BQ39	737 aa	Known RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	EDEM2	Q9BV94	578 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	NUSAP1	Q9BXS6	441 aa	Known RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	IRX2	Q9BZI1	471 aa	Predicted RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	INTS2	Q9H0H0	1204 aa	Known RBP	10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	FBXO10	Q9UK96	956 aa		10.88	□□□□□ -0.67
NR1I3-222	ENST00000506018	CNOT1	A5YKK6	2376 aa	Known RBP	10.87	□□□□□ -0.67
NR1I3-222	ENST00000506018	SPTBN2	O15020	2390 aa		10.87	□□□□□ -0.67
NR1I3-222	ENST00000506018	SYCE3	A1L190	88 aa		10.87	□□□□□ -0.67
NR1I3-222	ENST00000506018	YJEFN3	A6XGL0	299 aa		10.87	□□□□□ -0.67
NR1I3-222	ENST00000506018	PRRT4	C9JH25	899 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms