RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 METTL25Q8N6Q8 603 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 BOLLQ8N9W6 283 aaKnown RBP6.63□□□□□ -1.35
NIPBL-205ENST00000505998 NGDNQ8NEJ9 315 aaKnown RBP6.63□□□□□ -1.35
NIPBL-205ENST00000505998 ABHD5Q8WTS1 349 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 SARAFQ96BY9 339 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 ZG16BQ96DA0 208 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 BBC3Q96PG8 261 aaPredicted RBP6.63□□□□□ -1.35
NIPBL-205ENST00000505998 LENG8Q96PV6 779 aaPredicted RBP6.63□□□□□ -1.35
NIPBL-205ENST00000505998 SLITRK6Q9H5Y7 841 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 SLC39A10Q9ULF5 831 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 WNT6Q9Y6F9 365 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 IQGAP1P46940 1657 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 TRPM1Q7Z4N2 1603 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 UHRF1BP1Q6BDS2 1440 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 COL15A1P39059 1388 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 ADAMTS3O15072 1205 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 PDE8BO95263 885 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 ARP10275 920 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 MYCLP12524 364 aaPredicted RBP6.62□□□□□ -1.35
NIPBL-205ENST00000505998 MST1P26927 711 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 SLC5A2P31639 672 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 ELLP55199 621 aaPredicted RBP6.62□□□□□ -1.35
NIPBL-205ENST00000505998 INHBEP58166 350 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 EIF4A1P60842 406 aaKnown RBP6.62□□□□□ -1.35
NIPBL-205ENST00000505998 MAPKAPK3Q16644 382 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 ST3GAL2Q16842 350 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 SLC5A9Q2M3M2 681 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 DENND2CQ68D51 928 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 ABLIM2Q6H8Q1 611 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 NAPRTQ6XQN6 538 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 PTCHD4Q6ZW05 846 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 SPICE1Q8N0Z3 855 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 MUL1Q969V5 352 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 GRAMD1AQ96CP6 724 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 TMEM41AQ96HV5 264 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 VPS50Q96JG6 964 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 KRTAP4-11Q9BYQ6 195 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 PLCB1Q9NQ66 1216 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 NECTIN3Q9NQS3 549 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 ADAM21Q9UKJ8 722 aa6.62□□□□□ -1.35
NIPBL-205ENST00000505998 MAGED2Q9UNF1 606 aaPredicted RBP6.62□□□□□ -1.35
NIPBL-205ENST00000505998 NWD1Q149M9 1564 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 SPRY2O43597 315 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 JTBO76095 146 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 IGLV2-14P01704 120 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 FGAP02671 866 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 PECAM1P16284 738 aaPredicted RBP6.61□□□□□ -1.35
NIPBL-205ENST00000505998 CYP4F2P78329 520 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 RAB30Q15771 203 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 ARHGAP15Q53QZ3 475 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 FBXO42Q6P3S6 717 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 SUN3Q8TAQ9 357 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 PMM1Q92871 262 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 CTHRC1Q96CG8 243 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 WDYHV1Q96HA8 205 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 TTLL2Q9BWV7 592 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 PRDM13Q9H4Q3 707 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 SNX15Q9NRS6 342 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 SH3BP4Q9P0V3 963 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 C11orf21Q9P2W6 132 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 ARPP21Q9UBL0 812 aaPredicted RBP6.61□□□□□ -1.35
NIPBL-205ENST00000505998 MGAT4CQ9UBM8 478 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 LPAR3Q9UBY5 353 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 TAGLN3Q9UI15 199 aa6.61□□□□□ -1.35
NIPBL-205ENST00000505998 XRN1Q8IZH2 1706 aaKnown RBP6.61□□□□□ -1.35
NIPBL-205ENST00000505998 CHD2O14647 1828 aaKnown RBP6.6□□□□□ -1.35
NIPBL-205ENST00000505998 SPATA31A6Q5VVP1 1343 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 A8MVJ9 347 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 ZNF213O14771 459 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 TPD52L2O43399 206 aaKnown RBP6.6□□□□□ -1.35
NIPBL-205ENST00000505998 TMPRSS11DO60235 418 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 WDR47O94967 919 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 TMEM225BP0DP42 221 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 FPR3P25089 353 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 HTR7P34969 479 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 TNFAIP2Q03169 654 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 NSUN2Q08J23 767 aaKnown RBP eCLIP6.6□□□□□ -1.35
NIPBL-205ENST00000505998 TMTC4Q5T4D3 741 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 ARL6IP4Q66PJ3 421 aaKnown RBP6.6□□□□□ -1.35
NIPBL-205ENST00000505998 SFTPA1Q8IWL2 248 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 VPS37AQ8NEZ2 397 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 C18orf8Q96DM3 657 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 THAP7Q9BT49 309 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-205ENST00000505998 WDR12Q9GZL7 423 aaKnown RBP6.6□□□□□ -1.35
NIPBL-205ENST00000505998 TFCP2L1Q9NZI6 479 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 ASXL1Q8IXJ9 1541 aa6.6□□□□□ -1.35
NIPBL-205ENST00000505998 PIK3C2GO75747 1445 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 TMEM2Q9UHN6 1383 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 ZSCAN9O15535 394 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-205ENST00000505998 FFAR2O15552 330 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 EXOC3O60645 756 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 EIF3JO75822 258 aaKnown RBP6.59□□□□□ -1.35
NIPBL-205ENST00000505998 VIPP01282 170 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 SRGAP2BP0DMP2 458 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 IL6STP40189 918 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-205ENST00000505998 PSG6Q00889 435 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 FHL3Q13643 280 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 ATP1A4Q13733 1029 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 IDI1Q13907 227 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 SMN1Q16637 294 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms