RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 PM20D1Q6GTS8 502 aa25.85■■□□□ 1.73
HERC4-212ENST00000505760 KIAA1324Q6UXG2 1013 aaKnown RBP25.85■■□□□ 1.73
HERC4-212ENST00000505760 RABEPKQ7Z6M1 372 aa25.85■■□□□ 1.73
HERC4-212ENST00000505760 ZC3H3Q8IXZ2 948 aaKnown RBP25.85■■□□□ 1.73
HERC4-212ENST00000505760 UCMAQ8WVF2 138 aa25.85■■□□□ 1.73
HERC4-212ENST00000505760 ERCC4Q92889 916 aaPredicted RBP25.85■■□□□ 1.73
HERC4-212ENST00000505760 MRGPRX1Q96LB2 322 aa25.85■■□□□ 1.73
HERC4-212ENST00000505760 IPO9Q96P70 1041 aaKnown RBP25.85■■□□□ 1.73
HERC4-212ENST00000505760 SLC6A17Q9H1V8 727 aa25.85■■□□□ 1.73
HERC4-212ENST00000505760 STON1Q9Y6Q2 735 aa25.85■■□□□ 1.73
HERC4-212ENST00000505760 TRIM49BA6NDI0 452 aa25.84■■□□□ 1.73
HERC4-212ENST00000505760 TULP2O00295 520 aa25.84■■□□□ 1.73
HERC4-212ENST00000505760 NDUFS2O75306 463 aa25.84■■□□□ 1.73
HERC4-212ENST00000505760 GFPT1Q06210 699 aaPredicted RBP25.84■■□□□ 1.73
HERC4-212ENST00000505760 BST2Q10589 180 aaKnown RBP25.84■■□□□ 1.73
HERC4-212ENST00000505760 GEN1Q17RS7 908 aa25.84■■□□□ 1.73
HERC4-212ENST00000505760 DDI1Q8WTU0 396 aa25.84■■□□□ 1.73
HERC4-212ENST00000505760 PLD4Q96BZ4 506 aa25.84■■□□□ 1.73
HERC4-212ENST00000505760 HSPA12BQ96MM6 686 aa25.84■■□□□ 1.73
HERC4-212ENST00000505760 OLA1Q9NTK5 396 aaKnown RBP25.84■■□□□ 1.73
HERC4-212ENST00000505760 SLC6A14Q9UN76 642 aa25.84■■□□□ 1.73
HERC4-212ENST00000505760 NPC1O15118 1278 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 TBXAS1P24557 533 aaPredicted RBP25.83■■□□□ 1.73
HERC4-212ENST00000505760 ADIGQ0VDE8 80 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 LRMPQ12912 555 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 STIM1Q13586 685 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 ANKS1BQ7Z6G8 1248 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 CPXM2Q8N436 756 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 TRIML1Q8N9V2 468 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 DEFB124Q8NES8 71 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 ENGASEQ8NFI3 743 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 SPATA20Q8TB22 786 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 RNF139Q8WU17 664 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 NDRG1Q92597 394 aaKnown RBP25.83■■□□□ 1.73
HERC4-212ENST00000505760 SLC35C1Q96A29 364 aa25.83■■□□□ 1.73
HERC4-212ENST00000505760 GTPBP2Q9BX10 602 aaKnown RBP25.83■■□□□ 1.73
HERC4-212ENST00000505760 SERPINF2P08697 491 aa25.82■■□□□ 1.72
HERC4-212ENST00000505760 FOXC1Q12948 553 aa25.82■■□□□ 1.72
HERC4-212ENST00000505760 E2F5Q15329 346 aa25.82■■□□□ 1.72
HERC4-212ENST00000505760 FMNL3Q8IVF7 1028 aa25.82■■□□□ 1.72
HERC4-212ENST00000505760 SLC41A1Q8IVJ1 513 aa25.82■■□□□ 1.72
HERC4-212ENST00000505760 SIX6OS1Q8N1H7 587 aa25.82■■□□□ 1.72
HERC4-212ENST00000505760 UBA3Q8TBC4 463 aa25.82■■□□□ 1.72
HERC4-212ENST00000505760 SLC32A1Q9H598 525 aa25.82■■□□□ 1.72
HERC4-212ENST00000505760 METTL14Q9HCE5 456 aaKnown RBP25.82■■□□□ 1.72
HERC4-212ENST00000505760 FSCN3Q9NQT6 498 aa25.82■■□□□ 1.72
HERC4-212ENST00000505760 THAP10Q9P2Z0 257 aaPredicted RBP25.82■■□□□ 1.72
HERC4-212ENST00000505760 PSMA7O14818 248 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 SYNCRIPO60506 623 aaKnown RBP25.81■■□□□ 1.72
HERC4-212ENST00000505760 VDRP11473 427 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 HARS2P49590 506 aaKnown RBP25.81■■□□□ 1.72
HERC4-212ENST00000505760 ZNF132P52740 706 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 BECN1Q14457 450 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 FUT11Q495W5 492 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 RGL4Q8IZJ4 473 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 PIWIL1Q96J94 861 aaKnown RBP25.81■■□□□ 1.72
HERC4-212ENST00000505760 SLC2A11Q9BYW1 496 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 PRDM16Q9HAZ2 1276 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 CAPN10Q9HC96 672 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 CD93Q9NPY3 652 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 KIAA1257Q9ULG3 409 aa25.81■■□□□ 1.72
HERC4-212ENST00000505760 PCNX2A6NKB5 2137 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 SETSIPP0DME0 302 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 IL12RB1P42701 662 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 TRIP4Q15650 581 aaPredicted RBP25.8■■□□□ 1.72
HERC4-212ENST00000505760 SYCP2LQ5T4T6 812 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 BSPRYQ5W0U4 402 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 BHLHA9Q7RTU4 235 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 HDDC3Q8N4P3 179 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 EDEM1Q92611 657 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 TIGD1Q96MW7 591 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 CIPCQ9C0C6 399 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 ELOVL2Q9NXB9 296 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 CLEC4EQ9ULY5 219 aa25.8■■□□□ 1.72
HERC4-212ENST00000505760 HBS1LQ9Y450 684 aaKnown RBP25.8■■□□□ 1.72
HERC4-212ENST00000505760 YJEFN3A6XGL0 299 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 E7ENQ6 273 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 O00370 1275 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 FMO5P49326 533 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 NUCB2P80303 420 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 ARID5AQ03989 594 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 EIF4HQ15056 248 aaKnown RBP25.79■■□□□ 1.72
HERC4-212ENST00000505760 CCDC40Q4G0X9 1142 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 MPPE1Q53F39 396 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 ISM2Q6H9L7 571 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 TMEM270Q6UE05 265 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 FAM217AQ8IXS0 508 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 KCTD13Q8WZ19 329 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 FOXJ1Q92949 421 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 ZNF419Q96HQ0 510 aaPredicted RBP25.79■■□□□ 1.72
HERC4-212ENST00000505760 ABCC13Q9NSE7 274 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 SFMBT1Q9UHJ3 866 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 GTF3C3Q9Y5Q9 886 aa25.79■■□□□ 1.72
HERC4-212ENST00000505760 LCP1P13796 627 aa25.78■■□□□ 1.72
HERC4-212ENST00000505760 CD6P30203 668 aa25.78■■□□□ 1.72
HERC4-212ENST00000505760 ENPP2Q13822 863 aa25.78■■□□□ 1.72
HERC4-212ENST00000505760 ZNF234Q14588 700 aa25.78■■□□□ 1.72
HERC4-212ENST00000505760 WDR45BQ5MNZ6 344 aa25.78■■□□□ 1.72
HERC4-212ENST00000505760 METTL3Q86U44 580 aaKnown RBP25.78■■□□□ 1.72
HERC4-212ENST00000505760 UBR7Q8N806 425 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms