RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 IKBKGQ9Y6K9 419 aa3.89□□□□□ -1.79
HMGB1P22-201ENST00000505315 TRAV34A0A0B4J273 112 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 A8MXE2 369 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 EIF3CLB5ME19 914 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 PI4K2BG5E9Z4 385 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 CYP26A1O43174 497 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SYNCRIPO60506 623 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 PSPNO60542 156 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SEC14L2O76054 403 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 CHEK2O96017 543 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 F13BP05160 661 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 RB1P06400 928 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 ABCB1P08183 1280 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SNRNP70P08621 437 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 TMIGD3P0DMS9 266 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 PCP11498 1178 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 PEPDP12955 493 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 EEF2P13639 858 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 C6P13671 934 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 P4HA1P13674 534 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 KCNA2P16389 499 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 DRD1P21728 446 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 CPT2P23786 658 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 TM4SF1P30408 202 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 THBS4P35443 961 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 PBX3P40426 434 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 VIPR2P41587 438 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 CD86P42081 329 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 MATR3P43243 847 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 TNNT2P45379 298 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 PCP4P48539 62 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 HSD17B4P51659 736 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 PGDP52209 483 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 LILRA4P59901 499 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 EIF4A1P60842 406 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SNRPNP63162 240 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 CBX3Q13185 183 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 RCN2Q14257 317 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 STILQ15468 1287 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 C2orf76Q3KRA6 126 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 TRIM60Q495X7 471 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC9B1Q4ZJI4 515 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 FAM47AQ5JRC9 791 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 RAB41Q5JT25 222 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 KRBOX4Q5JUW0 171 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 MFSD14BQ5SR56 506 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 DENND1BQ6P3S1 775 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 INTS5Q6P9B9 1019 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 NCEH1Q6PIU2 408 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 CLEC9AQ6UXN8 241 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 USP51Q70EK9 711 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 CXXC5Q7LFL8 322 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 GPRIN1Q7Z2K8 1008 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 GAS2L3Q86XJ1 694 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 LRRC71Q8N4P6 559 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SYT2Q8N9I0 419 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 TDRD5Q8NAT2 981 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 PLA2G15Q8NCC3 412 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 TNIP2Q8NFZ5 429 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 RFWD2Q8NHY2 731 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 KIF18AQ8NI77 898 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SMARCC2Q8TAQ2 1214 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 TBC1D15Q8TC07 691 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 ARHGEF2Q92974 986 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC22A18Q96BI1 424 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 INTS12Q96CB8 462 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 KLHL29Q96CT2 875 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 ELP4Q96EB1 424 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 PERPQ96FX8 193 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZBTB45Q96K62 511 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 FAM227BQ96M60 508 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 C16orf45Q96MC5 204 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 C5orf34Q96MH7 638 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 TMEM237Q96Q45 408 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 ALPK1Q96QP1 1244 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 CLPBQ9H078 707 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC32A1Q9H598 525 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 GPR35Q9HC97 309 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SEMA4BQ9NPR2 832 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 RRP7BPQ9NSQ0 103 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 GIMAP4Q9NUV9 329 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 TBCCD1Q9NVR7 557 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZDHHC7Q9NXF8 308 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 HESX1Q9UBX0 185 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC23A1Q9UHI7 598 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 RAB21Q9UL25 225 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 NAP1L2Q9ULW6 460 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 DRG1Q9Y295 367 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 PTRH2Q9Y3E5 179 aaKnown RBP3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 CCL27Q9Y4X3 112 aa3.88□□□□□ -1.79
HMGB1P22-201ENST00000505315 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 CDHR4A6H8M9 788 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC38A8A6NNN8 435 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 BTBD18B2RXH4 712 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 GCOM1H8Y6P7 765 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 SNAP23O00161 211 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 POLRMTO00411 1230 aaKnown RBP3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 WNT10BO00744 389 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 NDC80O14777 642 aa3.87□□□□□ -1.79
HMGB1P22-201ENST00000505315 TP73O15350 636 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms