RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 BDNFP23560 247 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 ANXA13P27216 316 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 YWHAQP27348 245 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 ADSSP30520 456 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 COPAP53621 1224 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 RACK1P63244 317 aaKnown RBP6.36□□□□□ -1.39
GYPB-204ENST00000504951 CXADRP78310 365 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 SEMG2Q02383 582 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 VAC14Q08AM6 782 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 DHX8Q14562 1220 aaKnown RBP6.36□□□□□ -1.39
GYPB-204ENST00000504951 EIF4HQ15056 248 aaKnown RBP6.36□□□□□ -1.39
GYPB-204ENST00000504951 TMEM119Q4V9L6 283 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 COLEC12Q5KU26 742 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 MRPL14Q6P1L8 145 aaKnown RBP6.36□□□□□ -1.39
GYPB-204ENST00000504951 FMNL3Q8IVF7 1028 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 BRSK2Q8IWQ3 736 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 BBS7Q8IWZ6 715 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 ADGRF2Q8IZF7 708 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 NUP93Q8N1F7 819 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 NAT16Q8N8M0 369 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 SAP25Q8TEE9 199 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 UCMAQ8WVF2 138 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 KBTBD7Q8WVZ9 684 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 PRCCQ92733 491 aaPredicted RBP6.36□□□□□ -1.39
GYPB-204ENST00000504951 SKA1Q96BD8 255 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 GRAMD1AQ96CP6 724 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 PCED1BQ96HM7 432 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 SEMA3CQ99985 751 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 SYT15Q9BQS2 421 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 REEP2Q9BRK0 252 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 SLC2A11Q9BYW1 496 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 ELOVL4Q9GZR5 314 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 TM9SF3Q9HD45 589 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 ZDHHC4Q9NPG8 344 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 BLOC1S4Q9NUP1 217 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 DNAJC17Q9NVM6 304 aaKnown RBP6.36□□□□□ -1.39
GYPB-204ENST00000504951 PPP4R2Q9NY27 417 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 AGAP1Q9UPQ3 857 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 ZNF510Q9Y2H8 683 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 SH3BP1Q9Y3L3 701 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 STON1Q9Y6Q2 735 aa6.36□□□□□ -1.39
GYPB-204ENST00000504951 UBR5O95071 2799 aaPredicted RBP6.36□□□□□ -1.39
GYPB-204ENST00000504951 ARID1BQ8NFD5 2236 aaPredicted RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 BSNQ9UPA5 3926 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 WASH3PC4AMC7 463 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 F8VP50 259 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 H0Y8X5 98 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 K7ENP7 123 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 KIAA0391O15091 583 aaKnown RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 BRINP1O60477 761 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 PENKP01210 267 aaPredicted RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 ITGB3P05106 788 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 CKMT2P17540 419 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 GARTP22102 1010 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 ACP1P24666 158 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 ACAT1P24752 427 aaKnown RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 LMO2P25791 158 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 POLR2BP30876 1174 aaKnown RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 WASP42768 502 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 LSSP48449 732 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 DGKGP49619 791 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 PCBP4P57723 403 aaKnown RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 CAMK2GQ13555 558 aaPredicted RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 ANO4Q32M45 955 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 HES3Q5TGS1 186 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 ARL6IP4Q66PJ3 421 aaKnown RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 MCTP1Q6DN14 999 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 INO80CQ6PI98 192 aaPredicted RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 KIAA1324Q6UXG2 1013 aaKnown RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 ZNF720Q7Z2F6 126 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 DHX40Q8IX18 779 aaKnown RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 OXR1Q8N573 874 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 CSGALNACT2Q8N6G5 542 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 MYLPFQ96A32 169 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 FAM84AQ96KN4 292 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 CNDP2Q96KP4 475 aaKnown RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 ZSCAN31Q96LW9 406 aaPredicted RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 AK8Q96MA6 479 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 ELF4Q99607 663 aaPredicted RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 BBS2Q9BXC9 721 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 KLF16Q9BXK1 252 aaPredicted RBP6.35□□□□□ -1.39
GYPB-204ENST00000504951 SEMA4CQ9C0C4 833 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 MIR1-1HGQ9H1L0 117 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 SGK2Q9HBY8 427 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 CD93Q9NPY3 652 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 CYLDQ9NQC7 956 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 EVA1BQ9NVM1 165 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 SMPD4Q9NXE4 827 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 ADAMTS1Q9UHI8 967 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 SIX4Q9UIU6 781 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 CLCA2Q9UQC9 943 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 SNX9Q9Y5X1 595 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 CKAP5Q14008 2032 aa6.35□□□□□ -1.39
GYPB-204ENST00000504951 CLEC18AA5D8T8 446 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 TRIM24O15164 1050 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 SLC28A2O43868 658 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 SYNCRIPO60506 623 aaKnown RBP6.34□□□□□ -1.39
GYPB-204ENST00000504951 ATP2C2O75185 946 aa6.34□□□□□ -1.39
GYPB-204ENST00000504951 STAU1O95793 577 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms