RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 MOGSQ13724 837 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 CCL14Q16627 93 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 PDK4Q16654 411 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 LACTB2Q53H82 288 aaPredicted RBP10.06□□□□□ -0.8
CSF1R-203ENST00000504875 NLRP9Q7RTR0 991 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 NDUFAF2Q8N183 169 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 PDCD7Q8N8D1 485 aaKnown RBP10.06□□□□□ -0.8
CSF1R-203ENST00000504875 ALKBH8Q96BT7 664 aaKnown RBP10.06□□□□□ -0.8
CSF1R-203ENST00000504875 SIK2Q9H0K1 926 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 KRT82Q9NSB4 513 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 FARP1Q9Y4F1 1045 aaPredicted RBP10.06□□□□□ -0.8
CSF1R-203ENST00000504875 EEF2KO00418 725 aaKnown RBP10.06□□□□□ -0.8
CSF1R-203ENST00000504875 DNAJC8O75937 253 aaPredicted RBP10.06□□□□□ -0.8
CSF1R-203ENST00000504875 CBX6O95503 412 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 FAM200BP0CF97 657 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 NCAM1P13591 858 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 HOXA11P31270 313 aaPredicted RBP10.06□□□□□ -0.8
CSF1R-203ENST00000504875 PNPLA4P41247 253 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 CPT1AP50416 773 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 TKTL1P51854 596 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 NCALDP61601 193 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 CCDC6Q16204 474 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 MARCH8Q5T0T0 291 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 LDLRAD1Q5T700 205 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 RWDD4Q6NW29 188 aaKnown RBP10.06□□□□□ -0.8
CSF1R-203ENST00000504875 CES3Q6UWW8 571 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 SLC26A11Q86WA9 606 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 UNC93AQ86WB7 457 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 NUDCD3Q8IVD9 361 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 LRRC52Q8N7C0 313 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 LPPQ93052 612 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 GAD1Q99259 594 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 TMPRSS4Q9NRS4 437 aa10.06□□□□□ -0.8
CSF1R-203ENST00000504875 GABRB2P47870 512 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 RASSF2P50749 326 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 SCNN1BP51168 640 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 SESN3P58005 492 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 TTC39BQ5VTQ0 682 aaPredicted RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 ARHGAP22Q7Z5H3 698 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 PRPF39Q86UA1 669 aaKnown RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 RSPH3Q86UC2 560 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 MTDHQ86UE4 582 aaKnown RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 B3GALNT2Q8NCR0 500 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 FBXO41Q8TF61 875 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 EDEM1Q92611 657 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 ZNF570Q96NI8 536 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 SPC25Q9HBM1 224 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 DDX43Q9NXZ2 648 aaKnown RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 MFHAS1Q9Y4C4 1052 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 CHADO15335 359 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 ATP9BO43861 1147 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 SMNDC1O75940 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 FGFR1P11362 822 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 MLH1P40692 756 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 NDUFV1P49821 464 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 ERFP50548 548 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 TPI1P60174 286 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 YWHAZP63104 245 aaKnown RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 CUL3Q13618 768 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 FAM110CQ1W6H9 321 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 TNFAIP8L3Q5GJ75 292 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 OTOAQ7RTW8 1153 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 RELL1Q8IUW5 271 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 COLGALT1Q8NBJ5 622 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 SLC35F5Q8WV83 523 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 KCNN1Q92952 543 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 ATP2A3Q93084 1043 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 APOL2Q9BQE5 337 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 VRTNQ9H8Y1 702 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 DDIT4Q9NX09 232 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 IPPQ9Y573 584 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 A0A1B0GVG6 124 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 USP12O75317 370 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 SPAG6O75602 509 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 HAUS5O94927 633 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 PFKMP08237 780 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 GCAP28676 217 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 TPP2P29144 1249 aaPredicted RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 GRIA1P42261 906 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 TAF1BQ53T94 588 aaPredicted RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 PDZD4Q76G19 769 aaPredicted RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 PQLC3Q8N755 202 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 USP33Q8TEY7 942 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 TMEM40Q8WWA1 233 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 HTR3CQ8WXA8 447 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 CSPG4P5Q96PW8 444 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 KCTD15Q96SI1 283 aaPredicted RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 ZNF670Q9BS34 389 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 VPS11Q9H270 941 aa10.05□□□□□ -0.8
CSF1R-203ENST00000504875 PPARGC1AQ9UBK2 798 aaKnown RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 CORO1CQ9ULV4 474 aaPredicted RBP10.05□□□□□ -0.8
CSF1R-203ENST00000504875 WDR27A2RRH5 827 aa10.04□□□□□ -0.8
CSF1R-203ENST00000504875 A8MUI8 341 aa10.04□□□□□ -0.8
CSF1R-203ENST00000504875 SPTLC1O15269 473 aa10.04□□□□□ -0.8
CSF1R-203ENST00000504875 PRPF4O43172 522 aaKnown RBP eCLIP10.04□□□□□ -0.8
CSF1R-203ENST00000504875 MGRN1O60291 552 aa10.04□□□□□ -0.8
CSF1R-203ENST00000504875 EDF1O60869 148 aaKnown RBP10.04□□□□□ -0.8
CSF1R-203ENST00000504875 RTN3O95197 1032 aaPredicted RBP10.04□□□□□ -0.8
CSF1R-203ENST00000504875 METTL18O95568 372 aa10.04□□□□□ -0.8
CSF1R-203ENST00000504875 SRGAP2BP0DMP2 458 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms