RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 MMP8P22894 467 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 ADD2P35612 726 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 CCT5P48643 541 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 CDK7P50613 346 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 SF3A3Q12874 501 aaKnown RBP eCLIP6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 FAM187BQ17R55 369 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 ERCC6LQ2NKX8 1250 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 FAM153CQ494X1 144 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 MOGAT3Q86VF5 341 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 CCDC117Q8IWD4 279 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 TERB1Q8NA31 727 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 SLC16A11Q8NCK7 471 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 SPPL3Q8TCT6 385 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 RILPL2Q969X0 211 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 SARAFQ96BY9 339 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 AGAP2Q99490 1192 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 FAM167BQ9BTA0 163 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 CINPQ9BW66 212 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 KLK15Q9H2R5 256 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 FBXO28Q9NVF7 368 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 ASB6Q9NWX5 421 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 PCDHB7Q9Y5E2 793 aa6.32□□□□□ -1.4
TRAPPC13-206ENST00000504751 SLC38A8A6NNN8 435 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 HNRNPCP07910 306 aaKnown RBP eCLIP6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 GALNSP34059 522 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 THBS4P35443 961 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 IGHMBP2P38935 993 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 PPM1FP49593 454 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 COPB1P53618 953 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 SOX10P56693 466 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 FAM3BP58499 235 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 CFHR3Q02985 330 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 CCDC15Q0P6D6 951 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 BIRC3Q13489 604 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 AAK1Q2M2I8 961 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 GALNTL6Q49A17 601 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 CEP85Q6P2H3 762 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 ACSM6Q6P461 480 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 TRIM72Q6ZMU5 477 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 AMIGO2Q86SJ2 522 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 C12orf76Q8N812 135 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 OR52L2PQ8NGH6 319 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 MAFAQ8NHW3 353 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 CAGE1Q8TC20 777 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 TRAPPC9Q96Q05 1148 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 IKZF4Q9H2S9 585 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 PRDM13Q9H4Q3 707 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 CDCP1Q9H5V8 836 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 ELAC1Q9H777 363 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 CPNE5Q9HCH3 593 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 GAR1Q9NY12 217 aaKnown RBP6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 SERGEFQ9UGK8 458 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 FZD4Q9ULV1 537 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 LZTS1Q9Y250 596 aa6.31□□□□□ -1.4
TRAPPC13-206ENST00000504751 CCDC189A1A4V9 331 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 B9A039 149 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 H7C1Q1 480 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 EXOC3O60645 756 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 C1QL1O75973 258 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 LARGE1O95461 756 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 MATN1P21941 496 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 CLK3P49761 638 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 JAK3P52333 1124 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 RRAGAQ7L523 313 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 ZNF354CQ86Y25 554 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 ANKRD18AQ8IVF6 992 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 SMAP1Q8IYB5 467 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 HMGB4Q8WW32 186 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 GLMPQ8WWB7 406 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 RUBCNQ92622 972 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 TRIM63Q969Q1 353 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 DAZAP1Q96EP5 407 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 FAR2Q96K12 515 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 TWSG1Q9GZX9 223 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 USP29Q9HBJ7 922 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 G6PC2Q9NQR9 355 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 ABHD10Q9NUJ1 306 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 KIF17Q9P2E2 1029 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 FEM1BQ9UK73 627 aa6.3□□□□□ -1.4
TRAPPC13-206ENST00000504751 TCRBV5S1A1TA0A578 114 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 EFCAB8A8MWE9 144 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 NKX2-8O15522 239 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 MT-CO3P00414 261 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 CYP21A2P08686 494 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 ATF7P17544 494 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 GPD1P21695 349 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 CUL4BQ13620 913 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 FAM71DQ8N9W8 422 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 C3orf49Q96BT1 292 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 BRD8Q9H0E9 1235 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 ABHD16BQ9H3Z7 469 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 TAF1DQ9H5J8 278 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 CCDC134Q9H6E4 229 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 SEMA4GQ9NTN9 838 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 NDUFAF4Q9P032 175 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 SEMA5BQ9P283 1151 aa6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 ARPP21Q9UBL0 812 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-206ENST00000504751 TARM1B6A8C7 271 aa6.28□□□□□ -1.4
TRAPPC13-206ENST00000504751 H3BNC9 293 aa6.28□□□□□ -1.4
TRAPPC13-206ENST00000504751 JTBO76095 146 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms