RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 NT5DC3Q86UY8 548 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 FAM131BQ86XD5 332 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 CPNE8Q86YQ8 564 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 RHOT1Q8IXI2 618 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 SLC35F6Q8N357 371 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 HLA-CQ95604 372 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 SLC22A12Q96S37 553 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 RAB6CQ9H0N0 254 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 GDE1Q9NZC3 331 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 CALCOCO1Q9P1Z2 691 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 CDH22Q9UJ99 828 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 USP18Q9UMW8 372 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 JRKLQ9Y4A0 524 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 NOTCH4Q99466 2003 aa14.4□□□□□ -0.1
CYSTM1-202ENST00000504227 MIF4GDA9UHW6 222 aaKnown RBP14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 APOEP02649 317 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 TUBB4AP04350 444 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 KRT7P08729 469 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 ADRA1BP35368 520 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 HARS2P49590 506 aaKnown RBP14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 ATXN1P54253 815 aaKnown RBP14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 MTA1Q13330 715 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 EIF4EBP2Q13542 120 aaPredicted RBP14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 PPP2R5DQ14738 602 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 CBX2Q14781 532 aaPredicted RBP14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 RPS6KA1Q15418 735 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 DAB2IPQ5VWQ8 1189 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 GET4Q7L5D6 327 aaPredicted RBP14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 DDX42Q86XP3 938 aaKnown RBP eCLIP14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 UNC45BQ8IWX7 931 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 UBL4BQ8N7F7 174 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 FGF13Q92913 245 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 PLD4Q96BZ4 506 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 SLC39A13Q96H72 371 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 GKN1Q9NS71 199 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 SMPD4Q9NXE4 827 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 ARHGAP26Q9UNA1 814 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 USP15Q9Y4E8 981 aaPredicted RBP14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 CPQQ9Y646 472 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 ANAPC1Q9H1A4 1944 aa14.39□□□□□ -0.11
CYSTM1-202ENST00000504227 CCDC66A2RUB6 948 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 KIF2AO00139 706 aaPredicted RBP14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 PSTPIP1O43586 416 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 IGLV3-27P01718 113 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 IRF1P10914 325 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 CTNNA2P26232 953 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 WEE1P30291 646 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 GJC1P36383 396 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 AIF1P55008 147 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 TAS2R40P59535 323 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 ETF1P62495 437 aaKnown RBP14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 SMAD4Q13485 552 aaKnown RBP14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 ODF2Q5BJF6 829 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 ZFYVE27Q5T4F4 411 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 ERMARDQ5T6L9 678 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 MEI1Q5TIA1 1274 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 NUGGCQ68CJ6 796 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 NYAP1Q6ZVC0 841 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 POLNQ7Z5Q5 900 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 PSTKQ8IV42 348 aaKnown RBP14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 NPAS3Q8IXF0 933 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 ATP6V0D2Q8N8Y2 350 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 ZSCAN18Q8TBC5 510 aaPredicted RBP14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 CD101Q93033 1021 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 NTAN1Q96AB6 310 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 FCRL2Q96LA5 508 aaPredicted RBP14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 C16orf45Q96MC5 204 aaPredicted RBP14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 ZSWIM3Q96MP5 696 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 DCLK3Q9C098 648 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 TKTL2Q9H0I9 626 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 ZWILCHQ9H900 591 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 TDP1Q9NUW8 608 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 ARHGEF38Q9NXL2 777 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 CDH7Q9ULB5 785 aa14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 ZFP37Q9Y6Q3 630 aaPredicted RBP14.38□□□□□ -0.11
CYSTM1-202ENST00000504227 DENND4CQ5VZ89 1909 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 CTAGE9A4FU28 777 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 KCNU1A8MYU2 1149 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 STC2O76061 302 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 TCF4P15884 667 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 IL1R2P27930 398 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 CASQ1P31415 396 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 GBP2P32456 591 aaPredicted RBP14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 SLC11A2P49281 568 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 KCNQ1P51787 676 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 SLC25A11Q02978 314 aaKnown RBP14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 EFHC2Q5JST6 749 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 ARID3BQ8IVW6 561 aaPredicted RBP14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 CELF5Q8N6W0 485 aaKnown RBP14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 CCDC185Q8N715 623 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 TTC16Q8NEE8 873 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 SH3RF2Q8TEC5 729 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 TEKT4Q8WW24 435 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 SUSD6Q92537 303 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 USP13Q92995 863 aaPredicted RBP14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 HES6Q96HZ4 224 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 BTN2A3PQ96KV6 586 aa14.37□□□□□ -0.11
CYSTM1-202ENST00000504227 WDR24Q96S15 920 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms