RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 JAK3P52333 1124 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 SLC12A2P55011 1212 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 GPC5P78333 572 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 CCDC15Q0P6D6 951 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 STK3Q13188 491 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 ARHGEF7Q14155 803 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 SLC29A2Q14542 456 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 EARS2Q5JPH6 523 aaKnown RBP2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 TRAPPC11Q7Z392 1133 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 SKAP1Q86WV1 359 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 MICU3Q86XE3 530 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 ANKRD13AQ8IZ07 590 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 C11orf44Q8N8P7 122 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 IL31RAQ8NI17 732 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 PPP1R35Q8TAP8 253 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 PIGKQ92643 395 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 TRMT61AQ96FX7 289 aaKnown RBP2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 AIFM3Q96NN9 605 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 ACO2Q99798 780 aaKnown RBP2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 STK31Q9BXU1 1019 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 BRINP2Q9C0B6 783 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 FAM83DQ9H4H8 585 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 MYH16Q9H6N6 1097 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 RMI1Q9H9A7 625 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 RIMKLBQ9ULI2 386 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 LAS1LQ9Y4W2 734 aaKnown RBP2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 CCDC180Q9P1Z9 1646 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 LOC102724159A0A0B4J2E5 919 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 TRIM43BA6NCK2 446 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 RAB27BO00194 218 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 TBX3O15119 743 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 INMTO95050 263 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 PAPSS2O95340 614 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 TPH1P17752 444 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 AGFG1P52594 562 aaKnown RBP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 P2RX3P56373 397 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 EIF4A1P60842 406 aaKnown RBP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 IRX6P78412 446 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 POU3F1Q03052 451 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 DEUP1Q05D60 604 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 PWP2Q15269 919 aaKnown RBP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 MZT2AQ6P582 158 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 B3GNT9Q6UX72 402 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 MAEAQ7L5Y9 396 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 YAF2Q8IY57 180 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 METTL25Q8N6Q8 603 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 SLC44A5Q8NCS7 719 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 SLC35G2Q8TBE7 412 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 IGFBPL1Q8WX77 278 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 MAML1Q92585 1016 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 TAF15Q92804 592 aaKnown RBP eCLIP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 TRIM43Q96BQ3 446 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 GPATCH3Q96I76 525 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 KAZALD1Q96I82 304 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 LRGUKQ96M69 825 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 HIST1H2AAQ96QV6 131 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 FCRL5Q96RD9 977 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 TM2D2Q9BX73 214 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZNF556Q9HAH1 456 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 FZD3Q9NPG1 666 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 SACM1LQ9NTJ5 587 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 HIF1ANQ9NWT6 349 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 DDX56Q9NY93 547 aaKnown RBP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 DNAJB11Q9UBS4 358 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 AFF4Q9UHB7 1163 aaKnown RBP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 ASAP1Q9ULH1 1129 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 RIPOR2Q9Y4F9 1068 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 PCDHAC2Q9Y5I4 1007 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 SIRT4Q9Y6E7 314 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 CKAP5Q14008 2032 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 EVPLQ92817 2033 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 SPATA31A1Q5TZJ5 1347 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 FANCIQ9NVI1 1328 aa2.42□□□□□ -2.02
HMGB3P17-201ENST00000504195 A0A0B4J293 547 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 E2F8A0AVK6 867 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 DENND3A2RUS2 1198 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 CAPN8A6NHC0 703 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 ISM1B1AKI9 464 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZNF814B7Z6K7 855 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 AGPSO00116 658 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 RRHO14718 337 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 PRAMEF2O60811 474 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 TUSC2O75896 110 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 TMIGD3P0DMS9 266 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 PKMP14618 531 aaKnown RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 HOXB2P14652 356 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 BRAFP15056 766 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 RPS6KB1P23443 525 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 ACVR2AP27037 513 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 RBL1P28749 1068 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 NOVP48745 357 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 CPT1AP50416 773 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 SUMO3P55854 103 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 DSCR9P59020 149 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 WDR5P61964 334 aaKnown RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 PPATQ06203 517 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 MTA1Q13330 715 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 PTGR1Q14914 329 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 CLCA4Q14CN2 919 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 CCDC6Q16204 474 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms