RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 KBTBD7Q8WVZ9 684 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 SORCS1Q8WY21 1168 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 CCDC97Q96F63 343 aaPredicted RBP13.24□□□□□ -0.29
LSM6-204ENST00000504181 P2RY11Q96G91 374 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 EBF2Q9HAK2 575 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 LRRC4CQ9HCJ2 640 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 SATB2Q9UPW6 733 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 SLC27A6Q9Y2P4 619 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 RP1P56715 2156 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 IL18RAPO95256 599 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 CD38P28907 300 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 RBMS1P29558 406 aaKnown RBP13.23□□□□□ -0.29
LSM6-204ENST00000504181 CLN3Q13286 438 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 IGFBP7Q16270 282 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 BMP2KLQ5H9B9 411 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 KRT79Q5XKE5 535 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 XKR5Q6UX68 686 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 CRELD2Q6UXH1 353 aaPredicted RBP13.23□□□□□ -0.29
LSM6-204ENST00000504181 KANSL1Q7Z3B3 1105 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 NT5DC4Q86YG4 428 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 NUP93Q8N1F7 819 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 FAM26EQ8N5C1 309 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 LRRC52Q8N7C0 313 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 ZNF366Q8N895 744 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 MYCBPAPQ8TBZ2 947 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 OVCA2Q8WZ82 227 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 CCNL2Q96S94 520 aaPredicted RBP13.23□□□□□ -0.29
LSM6-204ENST00000504181 CIPCQ9C0C6 399 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 GZF1Q9H116 711 aaPredicted RBP13.23□□□□□ -0.29
LSM6-204ENST00000504181 LSM7Q9UK45 103 aaKnown RBP13.23□□□□□ -0.29
LSM6-204ENST00000504181 FBXO10Q9UK96 956 aa13.23□□□□□ -0.29
LSM6-204ENST00000504181 WNT9AO14904 365 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 EFSO43281 561 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 SIGLEC6O43699 453 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 OPA1O60313 960 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 SDC3O75056 442 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 CDC45O75419 566 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 RTN3O95197 1032 aaPredicted RBP13.22□□□□□ -0.29
LSM6-204ENST00000504181 DNTTP04053 509 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 AFMP43652 599 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 TUBP50607 506 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 CAMK2GQ13555 558 aaPredicted RBP13.22□□□□□ -0.29
LSM6-204ENST00000504181 TRIM29Q14134 588 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 USP53Q70EK8 1073 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 IGSF22Q8N9C0 903 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 SCAMP5Q8TAC9 235 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 LIN37Q96GY3 246 aaPredicted RBP13.22□□□□□ -0.29
LSM6-204ENST00000504181 ZNF518BQ9C0D4 1074 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 EPN3Q9H201 632 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 SGK2Q9HBY8 427 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 ELOVL2Q9NXB9 296 aa13.22□□□□□ -0.29
LSM6-204ENST00000504181 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.22□□□□□ -0.29
LSM6-204ENST00000504181 A0A1W2PNU3 283 aaPredicted RBP13.21□□□□□ -0.29
LSM6-204ENST00000504181 A0A1W2PR77 199 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 CLDN5O00501 218 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 TRIM38O00635 465 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 PFKFB2O60825 505 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 PPFIA2O75334 1257 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 TBX18O95935 607 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 SFTPCP11686 197 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 NXPH1P58417 271 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 RPS14P62263 151 aaKnown RBP13.21□□□□□ -0.29
LSM6-204ENST00000504181 ARID5AQ03989 594 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 ORC2Q13416 577 aaPredicted RBP13.21□□□□□ -0.29
LSM6-204ENST00000504181 TTC38Q5R3I4 469 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 SNX30Q5VWJ9 437 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 IGF2-ASQ6U949 168 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 TMC6Q7Z403 805 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 ANKS1BQ7Z6G8 1248 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 PTRH1Q86Y79 214 aaKnown RBP13.21□□□□□ -0.29
LSM6-204ENST00000504181 SYT2Q8N9I0 419 aaPredicted RBP13.21□□□□□ -0.29
LSM6-204ENST00000504181 NSUN7Q8NE18 718 aaKnown RBP13.21□□□□□ -0.29
LSM6-204ENST00000504181 CXorf38Q8TB03 319 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 KCNN1Q92952 543 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 PLIN2Q99541 437 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 SEMA3CQ99985 751 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 KLF16Q9BXK1 252 aaPredicted RBP13.21□□□□□ -0.29
LSM6-204ENST00000504181 RAB34Q9BZG1 259 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 OSBPL2Q9H1P3 480 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.29
LSM6-204ENST00000504181 CYP26A1O43174 497 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 TLR5O60602 858 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 RXRGP48443 463 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 PGFP49763 221 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 SLC12A3P55017 1021 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 ASIC1P78348 528 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 FOXK1P85037 733 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 GUCY1B3Q02153 619 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 SKIDA1Q1XH10 827 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 TTC31Q49AM3 519 aaPredicted RBP13.2□□□□□ -0.3
LSM6-204ENST00000504181 TMEM215Q68D42 235 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 FOXR1Q6PIV2 292 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 OXR1Q8N573 874 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 MYCT1Q8N699 235 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 C4orf32Q8N8J7 132 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 RBBP8NLQ8NC74 664 aaPredicted RBP13.2□□□□□ -0.3
LSM6-204ENST00000504181 CACTINQ8WUQ7 758 aaKnown RBP13.2□□□□□ -0.3
LSM6-204ENST00000504181 SGF29Q96ES7 293 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 PIWIL1Q96J94 861 aaKnown RBP13.2□□□□□ -0.3
LSM6-204ENST00000504181 SLC46A1Q96NT5 459 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms