RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 MMRN1Q13201 1228 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 TRMT5Q32P41 509 aaKnown RBP16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 C11orf96Q7Z7L8 435 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 ZNF410Q86VK4 478 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 LZTR1Q8N653 840 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 KAT2BQ92831 832 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 VTA1Q9NP79 307 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 RENBPP51606 427 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 EPHB3P54753 998 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 SFSWAPQ12872 951 aaKnown RBP16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 PRKAA1Q13131 559 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 SPANXN3Q5MJ09 141 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 OVOS1Q6IE37 1185 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 CASP10Q92851 521 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 GPRC5DQ9NZD1 345 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 HACD1B0YJ81 288 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 UBDO15205 165 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 IMPDH2P12268 514 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 FCGR1AP12314 374 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 IYDQ6PHW0 289 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 RIN3Q8TB24 985 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 APOPT1Q96IL0 206 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 PPP1R10Q96QC0 940 aaKnown RBP16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 GBA2Q9HCG7 927 aaPredicted RBP16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 CNTNAP2Q9UHC6 1331 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 CASTOR2A6NHX0 329 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 SNTNA6NMZ2 147 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 TTLL13PA6NNM8 815 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 NR5A2O00482 541 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 GUCA1CO95843 209 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 EPB42P16452 691 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 CCDC81Q6ZN84 652 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 TRIM48Q8IWZ4 208 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 SIKE1Q9BRV8 207 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 TMEM51Q9NW97 253 aa16.96■□□□□ 0.31
PCDHA1-203ENST00000504120 SERPINF2P08697 491 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 PECAM1P16284 738 aaPredicted RBP16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 UBE3AQ05086 875 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 ADIGQ0VDE8 80 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 N4BP2L1Q5TBK1 243 aaPredicted RBP16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 GPR141Q7Z602 305 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 AENQ8WTP8 325 aaKnown RBP16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 NDEL1Q9GZM8 345 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 DDX4Q9NQI0 724 aaKnown RBP16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 NINJ2Q9NZG7 142 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 CTNNAL1Q9UBT7 734 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 VTI1BQ9UEU0 232 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 DYRK1BQ9Y463 629 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 SPACA6W5XKT8 324 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 ADGRA3Q8IWK6 1321 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 ZMYM2Q9UBW7 1377 aa16.96■□□□□ 0.3
PCDHA1-203ENST00000504120 ZNF844Q08AG5 666 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 MFSD7Q6UXD7 560 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 PTAR1Q7Z6K3 402 aaPredicted RBP16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 HASPINQ8TF76 798 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 SMARCD1Q96GM5 515 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 KLHL4Q9C0H6 718 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 TMEM245Q9H330 911 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 PCDHB5Q9Y5E4 795 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 CBX4O00257 560 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 CSDE1O75534 798 aaKnown RBP16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 TFRCP02786 760 aaKnown RBP16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 RRM2P31350 389 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 TCF7L2Q9NQB0 619 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 UBP1Q9NZI7 540 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 DDX20Q9UHI6 824 aaKnown RBP16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 POLG2Q9UHN1 485 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 PNMA8BQ9ULN7 279 aaPredicted RBP16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 EML1O00423 815 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 ALDH1A2O94788 518 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 ALDH2P05091 517 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 VCLP18206 1134 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 CRABP2P29373 138 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 CHI3L1P36222 383 aaPredicted RBP16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 PLIN5Q00G26 463 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 NAB1Q13506 487 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 EIF1ADQ8N9N8 165 aaKnown RBP16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 ZFP42Q96MM3 310 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 CPNE1Q99829 537 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 IFNA14P01570 189 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 HMGCRP04035 888 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 SLC1A6P48664 564 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 FKBP1CQ5VVH2 108 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 C9orf131Q5VYM1 1079 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 APOBEC3HQ6NTF7 200 aaKnown RBP16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 SYNDIG1Q9H7V2 258 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 PRDM16Q9HAZ2 1276 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 MYO5BQ9ULV0 1848 aa16.95■□□□□ 0.3
PCDHA1-203ENST00000504120 DNAJB2P25686 324 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 ZNF135P52742 658 aaPredicted RBP16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 SLC6A3Q01959 620 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 CDC16Q13042 620 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 TAF2Q6P1X5 1199 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 KCNMB4Q86W47 210 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 KATNAL2Q8IYT4 538 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 KYQ8NBH2 561 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 PGM2Q96G03 612 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 MTG1Q9BT17 334 aaPredicted RBP16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 KRCC1Q9NPI7 259 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms