RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 FAM72BQ86X60 149 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 VSIG1Q86XK7 387 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 JAMLQ86YT9 394 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 TCEAL8Q8IYN2 117 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 PLCD3Q8N3E9 789 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 PLD5Q8N7P1 536 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 GLIS1Q8NBF1 620 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 KCTD6Q8NC69 237 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC35B2Q8TB61 432 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 ACTL9Q8TC94 416 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 SPPL3Q8TCT6 385 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CASKIN2Q8WXE0 1202 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 SEC14L1Q92503 715 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 SLCO2A1Q92959 643 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 FBXO32Q969P5 355 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 MAGOHBQ96A72 148 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 HAUS1Q96CS2 278 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC39A13Q96H72 371 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 FCRL2Q96LA5 508 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CEP295NLQ96MC4 621 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 KLHL5Q96PQ7 755 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CSPG4P5Q96PW8 444 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 RNF157Q96PX1 679 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 NCAPGQ9BPX3 1015 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 TCF25Q9BQ70 676 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 ZNF670Q9BS34 389 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 PLVAPQ9BX97 442 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CALN1Q9BXU9 219 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 NEUROG2Q9H2A3 272 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 FBXO44Q9H4M3 255 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 DHX35Q9H5Z1 703 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM204AQ9H8W3 233 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CYP4F11Q9HBI6 524 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 ZNF334Q9HCZ1 680 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 GDF3Q9NR23 364 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 MRPL17Q9NRX2 175 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 ABCC13Q9NSE7 274 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 ETNK2Q9NVF9 386 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 COMMD8Q9NX08 183 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 ARHGEF38Q9NXL2 777 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 RRN3Q9NYV6 651 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CLIC5Q9NZA1 410 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 CWC15Q9P013 229 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 STIM2Q9P246 746 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 XPO7Q9UIA9 1087 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 FBXW11Q9UKB1 542 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 DNPEPQ9ULA0 475 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 LZTS1Q9Y250 596 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 INSL5Q9Y5Q6 135 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 IRAK3Q9Y616 596 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 RANBP2P49792 3224 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 NUP205Q92621 2012 aa7.17□□□□□ -1.26
TOPBP1-203ENST00000503464 GOLGA6L10A0A0M3HER8 536 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 CCDC85CA6NKD9 419 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 KCNU1A8MYU2 1149 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 TJP3O95049 919 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 CSPG5O95196 566 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 CXCL14O95715 111 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 IGLV3-27P01718 113 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 RARGP13631 454 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 TNFRSF8P28908 595 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 TUFMP49411 452 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 TUBB4BP68371 445 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 DR1Q01658 176 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 OTUD4Q01804 1114 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 GUCY2DQ02846 1103 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 KRT17Q04695 432 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 TWF1Q12792 350 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC10A2Q12908 348 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 KRT81Q14533 505 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 CCNG2Q16589 344 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 PPP6R3Q5H9R7 873 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 ZFYVE27Q5T4F4 411 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 MANEALQ5VSG8 457 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 SNX30Q5VWJ9 437 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 PLPP4Q5VZY2 271 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 BTBD8Q5XKL5 378 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 DUPD1Q68J44 220 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 NCBP2-AS2Q69YL0 99 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 ZDHHC24Q6UX98 284 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 B4GALNT4Q76KP1 1039 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 PRUNE1Q86TP1 453 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 DDX42Q86XP3 938 aaKnown RBP eCLIP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 RFX6Q8HWS3 928 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 PSTKQ8IV42 348 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 RNF139Q8WU17 664 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 POF1BQ8WVV4 589 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 NKD2Q969F2 451 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 TRMT2BQ96GJ1 504 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 MYRFLQ96LU7 910 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 TRIM62Q9BVG3 475 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 LRRC3Q9BY71 257 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 TKTL2Q9H0I9 626 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 CCSER2Q9H7U1 834 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 C10orf88Q9H8K7 445 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 IL21Q9HBE4 155 aa7.16□□□□□ -1.26
TOPBP1-203ENST00000503464 ARHGEF4Q9NR80 690 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms