RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 CALCOCO1Q9P1Z2 691 aa11.26□□□□□ -0.61
SNCA-207ENST00000502987 RAD54BQ9Y620 910 aa11.26□□□□□ -0.61
SNCA-207ENST00000502987 KMT2BQ9UMN6 2715 aaPredicted RBP11.25□□□□□ -0.61
SNCA-207ENST00000502987 SLC12A8A0AV02 714 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 WASH3PC4AMC7 463 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 CDX4O14627 284 aaPredicted RBP11.25□□□□□ -0.61
SNCA-207ENST00000502987 GREM1O60565 184 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 SMC2O95347 1197 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 CD19P15391 556 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 ENGP17813 658 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 NDUFV2P19404 249 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 CORO1AP31146 461 aaKnown RBP11.25□□□□□ -0.61
SNCA-207ENST00000502987 PRCPP42785 496 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 RAD23BP54727 409 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 YWHAGP61981 247 aaKnown RBP eCLIP11.25□□□□□ -0.61
SNCA-207ENST00000502987 ARID5AQ03989 594 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 ZNF33AQ06730 810 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 DUOXA1Q1HG43 343 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 KIAA1211LQ6NV74 962 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 DENND1CQ8IV53 801 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 HDDC3Q8N4P3 179 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 SLC4A11Q8NBS3 891 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 DEFB124Q8NES8 71 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 CEP76Q8TAP6 659 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 DDI1Q8WTU0 396 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 RNF139Q8WU17 664 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 UCMAQ8WVF2 138 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 SLC6A17Q9H1V8 727 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 CLIC5Q9NZA1 410 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 MARK1Q9P0L2 795 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 MARCH2Q9P0N8 246 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 HESX1Q9UBX0 185 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 EVLQ9UI08 416 aaPredicted RBP11.25□□□□□ -0.61
SNCA-207ENST00000502987 PILRBQ9UKJ0 227 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 SLC6A14Q9UN76 642 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 USP3Q9Y6I4 520 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 FRYQ5TBA9 3013 aa11.25□□□□□ -0.61
SNCA-207ENST00000502987 ASCC3Q8N3C0 2202 aaKnown RBP11.24□□□□□ -0.61
SNCA-207ENST00000502987 A0A1W2PQF6 199 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 KLKB1P03952 638 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 CISD3P0C7P0 127 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 CEACAM1P13688 526 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 TKTL1P51854 596 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 YWHAEP62258 255 aaKnown RBP11.24□□□□□ -0.61
SNCA-207ENST00000502987 LRMPQ12912 555 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 GOLGA7BQ2TAP0 167 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 ZCWPW2Q504Y3 356 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 SGO2Q562F6 1265 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 SYCP2LQ5T4T6 812 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 SLC23A3Q6PIS1 610 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 Q6ZNB5 142 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 RABEPKQ7Z6M1 372 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 PIGZQ86VD9 579 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 ZNF276Q8N554 614 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 TRIML1Q8N9V2 468 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 ANKRD52Q8NB46 1076 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 NDRG1Q92597 394 aaKnown RBP11.24□□□□□ -0.61
SNCA-207ENST00000502987 FAXDC2Q96IV6 333 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 HSPA12BQ96MM6 686 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 IPO9Q96P70 1041 aaKnown RBP11.24□□□□□ -0.61
SNCA-207ENST00000502987 ARID3AQ99856 593 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 ULBP1Q9BZM6 244 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 UBXN6Q9BZV1 441 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 LRRC4Q9HBW1 653 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 FSCN3Q9NQT6 498 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 HOOK1Q9UJC3 728 aaKnown RBP11.24□□□□□ -0.61
SNCA-207ENST00000502987 HCN2Q9UL51 889 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 STON1Q9Y6Q2 735 aa11.24□□□□□ -0.61
SNCA-207ENST00000502987 IGHV1OR15-9A0A0B4J2B8 117 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 GFRA2O00451 464 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 SYNCRIPO60506 623 aaKnown RBP11.23□□□□□ -0.61
SNCA-207ENST00000502987 TSPAN3O60637 253 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 ZBED1O96006 694 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 SYPP08247 313 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 SERPINF2P08697 491 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 CSRP1P21291 193 aaKnown RBP11.23□□□□□ -0.61
SNCA-207ENST00000502987 HARS2P49590 506 aaKnown RBP11.23□□□□□ -0.61
SNCA-207ENST00000502987 SHC2P98077 582 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 FKBP3Q00688 224 aaKnown RBP11.23□□□□□ -0.61
SNCA-207ENST00000502987 STIM1Q13586 685 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 E2F5Q15329 346 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 ZNF658Q5TYW1 1059 aaPredicted RBP11.23□□□□□ -0.61
SNCA-207ENST00000502987 ANKRD40Q6AI12 368 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 SIX6OS1Q8N1H7 587 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 UBA3Q8TBC4 463 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 SMARCE1Q969G3 411 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 GABRG3Q99928 467 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 CIPCQ9C0C6 399 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 PRDM16Q9HAZ2 1276 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 ARMCX3Q9UH62 379 aaPredicted RBP11.23□□□□□ -0.61
SNCA-207ENST00000502987 TSPAN16Q9UKR8 245 aa11.23□□□□□ -0.61
SNCA-207ENST00000502987 AGO1Q9UL18 857 aaKnown RBP11.23□□□□□ -0.61
SNCA-207ENST00000502987 CEP295Q9C0D2 2601 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 TULP2O00295 520 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 OPHN1O60890 802 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 ACADMP11310 421 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 LCP1P13796 627 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 GNSP15586 552 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 SPINK2P20155 84 aa11.22□□□□□ -0.61
SNCA-207ENST00000502987 RDXP35241 583 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms