RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 FGFBP2Q9BYJ0 223 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 CROTQ9UKG9 612 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 POLIQ9UNA4 740 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 DISP2A7MBM2 1401 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 TCRBV7S2A1N4TA0A589 114 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 OGTO15294 1046 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 UPP2O95045 317 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 C6orf222P0C671 652 aaPredicted RBP17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 CREB1P16220 341 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 ACAP1Q15027 740 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 CCDC103Q8IW40 242 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 ZFAND2BQ8WV99 257 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 GPRASP2Q96D09 838 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 FAM208AQ9UK61 1670 aaKnown RBP17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 A0A0B4J269 797 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 UBAP2LQ14157 1087 aaKnown RBP17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 ISLR2Q6UXK2 745 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 DIS3LQ8TF46 1054 aaKnown RBP17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 C1orf50Q9BV19 199 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 WDR41Q9HAD4 459 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 LMCD1Q9NZU5 365 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 DFFAO00273 331 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 VCLP18206 1134 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 NAMPTP43490 491 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 GOLGA7BQ2TAP0 167 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 ERO1BQ86YB8 467 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 FBXW8Q8N3Y1 598 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 AGBL1Q96MI9 1066 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 ZNF560Q96MR9 790 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 MTMR12Q9C0I1 747 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 RUBCNLQ9H714 662 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 PRR5-ARHGAP8B1AHC4 643 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 ARHGAP8P85298 464 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 CYP1B1Q16678 543 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 DGKDQ16760 1214 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 RINLQ6ZS11 566 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 WDR49Q8IV35 697 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 C9orf16Q9BUW7 83 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 SYBUQ9NX95 663 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 SH3GLB1Q9Y371 365 aa17.68■□□□□ 0.42
HMGXB3-201ENST00000502717 CCL15-CCL14A0A0B4J2E2 113 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 ADCY6O43306 1168 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 KDELR1P24390 212 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 CCL15Q16663 113 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 SAMD4BQ5PRF9 694 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 ATF7IP2Q5U623 682 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 FAM172AQ8WUF8 416 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 RXFP2Q8WXD0 754 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 TBCBQ99426 244 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 PARVBQ9HBI1 364 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 CYLDQ9NQC7 956 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 PRPF19Q9UMS4 504 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 UBA6A0AVT1 1052 aaPredicted RBP17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 NFKBIAP25963 317 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 SOX11P35716 441 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 NFIAQ12857 509 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 GLRA4Q5JXX5 417 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 MAP4K3Q8IVH8 894 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 UNC45BQ8IWX7 931 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 PQLC1Q8N2U9 271 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 AGBL3Q8NEM8 1001 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 ACMSDQ8TDX5 336 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 EPS8L2Q9H6S3 715 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 FAM49BQ9NUQ9 324 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 RIC8BQ9NVN3 520 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 PHGDHO43175 533 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 EIF4BP23588 611 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 GLRBP48167 497 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 PKNOX1P55347 436 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 CHRNB3Q05901 458 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 NRF1Q16656 503 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 CCDC80Q76M96 950 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 ZCCHC7Q8N3Z6 543 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 FAM163AQ96GL9 167 aaPredicted RBP17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 GPATCH2LQ9NWQ4 482 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 CIDEBQ9UHD4 219 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 PSMD13Q9UNM6 376 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 V9GYQ6 96 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 ANKRD63C9JTQ0 380 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 PGAM1P18669 254 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 RGS21Q2M5E4 152 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 SPDYAQ5MJ70 313 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 IER5Q5VY09 327 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 PRMT9Q6P2P2 845 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 CDC26Q8NHZ8 85 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 UCMAQ8WVF2 138 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 CPNE1Q99829 537 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 PTTG2Q9NZH5 202 aa17.67■□□□□ 0.42
HMGXB3-201ENST00000502717 DDHD2O94830 711 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 ICAM1P05362 532 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 CCDC130P13994 396 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 FOXN2P32314 431 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 MTMR2Q13614 643 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 CAMK1DQ8IU85 385 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 GLMNQ92990 594 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 PCDHB18PQ96TA0 734 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 SIK2Q9H0K1 926 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 MAP3K20Q9NYL2 800 aaKnown RBP17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 FOXO6A8MYZ6 492 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 SPATA31C1P0DKV0 1188 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms