RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 AIF1P55008 147 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 KLC1Q07866 573 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 OVGP1Q12889 678 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 KPNB1Q14974 876 aaKnown RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 CAPN12Q6ZSI9 719 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 SMC1BQ8NDV3 1235 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 ZNF778Q96MU6 729 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 SPATA13Q96N96 652 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 KATNBL1Q9H079 304 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 ASCC2Q9H1I8 757 aaPredicted RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 KRT82Q9NSB4 513 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 DPP3Q9NY33 737 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 SCAF8Q9UPN6 1271 aaKnown RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 POLR2AP24928 1970 aaKnown RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 A0A0G2JND7 137 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 H7C0C1 242 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 METTL18O95568 372 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 ESRRAP11474 423 aaPredicted RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 DESP17661 470 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 PGAM1P18669 254 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 PAX7P23759 505 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 ACADSBP45954 432 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 ATP5OP48047 213 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 SLC10A2Q12908 348 aaPredicted RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 IRF5Q13568 498 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 KRT81Q14533 505 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 PAFAH1B3Q15102 231 aaKnown RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 ZRSR2Q15696 482 aaKnown RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 CA9Q16790 459 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 C15orf59Q2T9L4 293 aaPredicted RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 RAB6CQ53S08 254 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 TEDDM1Q5T9Z0 273 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 FAXCQ5TGI0 409 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 SNX30Q5VWJ9 437 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 DHX37Q8IY37 1157 aaKnown RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 PPTC7Q8NI37 304 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 FAM172AQ8WUF8 416 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 ARNTL2Q8WYA1 636 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 RAB6CQ9H0N0 254 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 C12orf65Q9H3J6 166 aaKnown RBP7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 GDAP2Q9NXN4 497 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 DCTN4Q9UJW0 460 aa7.46□□□□□ -1.22
LYSMD3-203ENST00000500869 FAM237BA0A1B0GVD1 139 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 BUD23O43709 281 aaKnown RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 OPHN1O60890 802 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 TBX10O75333 385 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 DAB1O75553 588 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 ARF4P18085 180 aaPredicted RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 GRK2P25098 689 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 SDC4P31431 198 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 LAMC2Q13753 1193 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 RCN1Q15293 331 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 PMF1Q6P1K2 205 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 CLEC14AQ86T13 490 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 LCA5Q86VQ0 697 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 WDR60Q8WVS4 1066 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 HSFY1Q96LI6 401 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 SPATA33Q96N06 139 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 KCTD15Q96SI1 283 aaPredicted RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 DCDC2Q9UHG0 476 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 TRIP11Q15643 1979 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 SPDYE5A6NIY4 337 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 ASB14A6NK59 587 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 GOLGA8RI6L899 631 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 CASQ2O14958 399 aaPredicted RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 PLIN3O60664 434 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 H2AFYO75367 372 aaKnown RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 KRT36O76013 467 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 PROCP04070 461 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 CAPNS1P04632 268 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 SKIP12755 728 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 CDK7P50613 346 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 OTUD1Q5VV17 481 aaPredicted RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 OR6B2Q6IFH4 312 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 TRIM50Q86XT4 487 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 CRLF3Q8IUI8 442 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 GPC2Q8N158 579 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 JADE3Q92613 823 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 AZIN2Q96A70 460 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 CFAP36Q96G28 342 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 HEXIM2Q96MH2 286 aaKnown RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 CSPG4P5Q96PW8 444 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 FAM192AQ9GZU8 254 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 VTA1Q9NP79 307 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 GGA3Q9NZ52 723 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 FZD10Q9ULW2 581 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 SCN1AP35498 2009 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 DCAF8L1A6NGE4 600 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 INO80B-WBP1J3KQ70 363 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 AVILO75366 819 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 KLHL2O95198 593 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 SERPINE1P05121 402 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 VAV1P15498 845 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 SP100P23497 879 aaPredicted RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 SARNPP82979 210 aaKnown RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 BST2Q10589 180 aaKnown RBP7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 SCAPQ12770 1279 aa7.45□□□□□ -1.22
LYSMD3-203ENST00000500869 PPIL2Q13356 520 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms