RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 C12orf29Q8N999 325 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 ENGASEQ8NFI3 743 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 C1orf216Q8TAB5 229 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 SYAP1Q96A49 352 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-209ENST00000498725 NXPE2Q96DL1 559 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 TMX3Q96JJ7 454 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 TNIP3Q96KP6 325 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 LHX5Q9H2C1 402 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 FBXO44Q9H4M3 255 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 PRORYQ9H606 182 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 KIAA1586Q9HCI6 787 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 ASH1LQ9NR48 2969 aaKnown RBP9.6□□□□□ -0.87
CCDC171-209ENST00000498725 HMGXB4Q9UGU5 601 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 RASAL2Q9UJF2 1139 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 FBXO2Q9UK22 296 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-209ENST00000498725 NAGPAQ9UK23 515 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 CLEC4EQ9ULY5 219 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 NFE2L3Q9Y4A8 694 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 FAM47DPA6NHR8 397 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 TK2O00142 265 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 ENC1O14682 589 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 RRP8O43159 456 aaKnown RBP9.59□□□□□ -0.87
CCDC171-209ENST00000498725 TSPAN3O60637 253 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 EIF5BO60841 1220 aaKnown RBP9.59□□□□□ -0.87
CCDC171-209ENST00000498725 KLKB1P03952 638 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 CORO1AP31146 461 aaKnown RBP9.59□□□□□ -0.87
CCDC171-209ENST00000498725 HNF1BP35680 557 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 PLA2G4AP47712 749 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 CXADRP78310 365 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 TARDBPQ13148 414 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCDC171-209ENST00000498725 FNDC3BQ53EP0 1204 aaKnown RBP9.59□□□□□ -0.87
CCDC171-209ENST00000498725 FYB2Q5VWT5 728 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 FAM173BQ6P4H8 233 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 Q6ZNB5 142 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 BRAPQ7Z569 592 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 ANKS1BQ7Z6G8 1248 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 CYB5D2Q8WUJ1 264 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 IGSF8Q969P0 613 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 BIRC7Q96CA5 298 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 NAF1Q96HR8 494 aaKnown RBP9.59□□□□□ -0.87
CCDC171-209ENST00000498725 DUSP9Q99956 384 aaKnown RBP9.59□□□□□ -0.87
CCDC171-209ENST00000498725 XYLT2Q9H1B5 865 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 COMMD8Q9NX08 183 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 ELOVL2Q9NXB9 296 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 FBXO10Q9UK96 956 aa9.59□□□□□ -0.87
CCDC171-209ENST00000498725 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.59□□□□□ -0.87
CCDC171-209ENST00000498725 HELZ2Q9BYK8 2649 aaKnown RBP9.59□□□□□ -0.87
CCDC171-209ENST00000498725 NYNRINQ9P2P1 1898 aaKnown RBP9.59□□□□□ -0.87
CCDC171-209ENST00000498725 COL5A1P20908 1838 aaPredicted RBP9.59□□□□□ -0.88
CCDC171-209ENST00000498725 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.58□□□□□ -0.88
CCDC171-209ENST00000498725 FAM92AA1XBS5 289 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 FRMD3A2A2Y4 597 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 CAPN9O14815 690 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 TGFB1I1O43294 461 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 CD2BP2O95400 341 aaKnown RBP9.58□□□□□ -0.88
CCDC171-209ENST00000498725 LDOC1O95751 146 aaPredicted RBP9.58□□□□□ -0.88
CCDC171-209ENST00000498725 SEMA4FO95754 770 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 CYBBP04839 570 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 FAM163BP0C2L3 166 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 FAM200BP0CF97 657 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 ABCB4P21439 1286 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 ATICP31939 592 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 NDST1P52848 882 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 C21orf59P57076 290 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 EFEMP1Q12805 493 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 INAVAQ3KP66 663 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 TMEM215Q68D42 235 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 CCDC73Q6ZRK6 1079 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 TMPRSS12Q86WS5 348 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 DENND1CQ8IV53 801 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 EID2Q8N6I1 236 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 XXYLT1Q8NBI6 393 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 GANCQ8TET4 914 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 DDI1Q8WTU0 396 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 PIWIL1Q96J94 861 aaKnown RBP9.58□□□□□ -0.88
CCDC171-209ENST00000498725 CNDP2Q96KP4 475 aaKnown RBP9.58□□□□□ -0.88
CCDC171-209ENST00000498725 CYLDQ9NQC7 956 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 AGPAT3Q9NRZ7 376 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCDC171-209ENST00000498725 SCML2Q9UQR0 700 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 SLC27A6Q9Y2P4 619 aa9.58□□□□□ -0.88
CCDC171-209ENST00000498725 SRPRBQ9Y5M8 271 aaKnown RBP9.58□□□□□ -0.88
CCDC171-209ENST00000498725 J3QKU1 62 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 SNPHO15079 494 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 NPC1O15118 1278 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 PCDHGA12O60330 932 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 RFPL3O75679 317 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 PENKP01210 267 aaPredicted RBP9.57□□□□□ -0.88
CCDC171-209ENST00000498725 IGLV3-19P01714 112 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 ITGAVP06756 1048 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 CTSKP43235 329 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 GRIA4P48058 902 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 ZNF132P52740 706 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 ASIC1P78348 528 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 CFHR1Q03591 330 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 ENPP2Q13822 863 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 TAF1BQ53T94 588 aaPredicted RBP9.57□□□□□ -0.88
CCDC171-209ENST00000498725 HES3Q5TGS1 186 aa9.57□□□□□ -0.88
CCDC171-209ENST00000498725 SPOPLQ6IQ16 392 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms