RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CPXM2Q8N436 756 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 EPS8L1Q8TE68 723 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 DQX1Q8TE96 717 aaKnown RBP13.34□□□□□ -0.27
HSPG2-213ENST00000498495 DDI1Q8WTU0 396 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 BHMTQ93088 406 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 NKD2Q969F2 451 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-213ENST00000498495 C18orf8Q96DM3 657 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 SEMA4AQ9H3S1 761 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 DNAJC17Q9NVM6 304 aaKnown RBP13.34□□□□□ -0.27
HSPG2-213ENST00000498495 ASNSD1Q9NWL6 643 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 MYOFQ9NZM1 2061 aa13.33□□□□□ -0.27
HSPG2-213ENST00000498495 PROB1E7EW31 1015 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 CACNG3O60359 315 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 HSF2BPO75031 334 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 GRAP2O75791 330 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 PAPSS2O95340 614 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-213ENST00000498495 LATS1O95835 1130 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 TRUB2O95900 331 aaKnown RBP13.33□□□□□ -0.28
HSPG2-213ENST00000498495 CCDC172P0C7W6 258 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 GBP1P32455 592 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 TIE1P35590 1138 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 SLC11A2P49281 568 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 DGKGP49619 791 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 ZNF445P59923 1031 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 CDK17Q00537 523 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 CDR2Q01850 454 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 ARID5AQ03989 594 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 RING1Q06587 406 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 NR1I3Q14994 352 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 PTPN20Q4JDL3 420 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 MPPE1Q53F39 396 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 ADGRF1Q5T601 910 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 EMC10Q5UCC4 262 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 FAM183BPQ6ZVS7 135 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 SYT13Q7L8C5 426 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 DEFB106AQ8N104 65 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 MSANTD4Q8NCY6 345 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 ADAM32Q8TC27 787 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 USP33Q8TEY7 942 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 NELL1Q92832 810 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 AZIN2Q96A70 460 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 ACDQ96AP0 544 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 TMA16Q96EY4 203 aaKnown RBP13.33□□□□□ -0.28
HSPG2-213ENST00000498495 NAP1L5Q96NT1 182 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-213ENST00000498495 C2orf42Q9NWW7 574 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 TLR6Q9Y2C9 796 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 PCDHGA2Q9Y5H1 932 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 CACNA1IQ9P0X4 2223 aa13.33□□□□□ -0.28
HSPG2-213ENST00000498495 A0A1B0GTH6 734 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 K7ESF4 209 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 TRIM24O15164 1050 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 ACSL4O60488 711 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 TSPAN3O60637 253 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 LSM8O95777 96 aaKnown RBP13.32□□□□□ -0.28
HSPG2-213ENST00000498495 IGLV3-27P01718 113 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 TDGF1P13385 188 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 MRE11P49959 708 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 RNASE9P60153 205 aaKnown RBP13.32□□□□□ -0.28
HSPG2-213ENST00000498495 MESP2Q0VG99 397 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 NNTQ13423 1086 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 C10orf76Q5T2E6 689 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 FYB2Q5VWT5 728 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 HEATR6Q6AI08 1181 aaKnown RBP13.32□□□□□ -0.28
HSPG2-213ENST00000498495 SFTPA1Q8IWL2 248 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 FAM217AQ8IXS0 508 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 PHTF2Q8N3S3 785 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 CCDC33Q8N5R6 958 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 CAMKK1Q8N5S9 505 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 TERB1Q8NA31 727 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 ZBTB44Q8NCP5 570 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 KCNV2Q8TDN2 545 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 SLC20A1Q8WUM9 679 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 CPA5Q8WXQ8 436 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 PIWIL1Q96J94 861 aaKnown RBP13.32□□□□□ -0.28
HSPG2-213ENST00000498495 DDX50Q9BQ39 737 aaKnown RBP13.32□□□□□ -0.28
HSPG2-213ENST00000498495 SLC12A6Q9UHW9 1150 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 STOML2Q9UJZ1 356 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 NOCTQ9UK39 431 aaKnown RBP13.32□□□□□ -0.28
HSPG2-213ENST00000498495 FBXO10Q9UK96 956 aa13.32□□□□□ -0.28
HSPG2-213ENST00000498495 GOLGA6L7A0A1B0GV03 622 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 A0A1W2PQC6 194 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 FAM170AA1A519 330 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 ANTXRLA6NF34 631 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 PENKP01210 267 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-213ENST00000498495 APOEP02649 317 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 CISD3P0C7P0 127 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 FERP16591 822 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 CHRNB2P17787 502 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 HOXA6P31267 233 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 NOS2P35228 1153 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 GABRB2P47870 512 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 FNTBP49356 437 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 FANCCQ00597 558 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 FMO1Q01740 532 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 DMC1Q14565 340 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 HSF5Q4G112 596 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-213ENST00000498495 NAA35Q5VZE5 725 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 OLFML1Q6UWY5 402 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 TRIM72Q6ZMU5 477 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 SLC26A9Q7LBE3 791 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms