RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 DDX42Q86XP3 938 aaKnown RBP eCLIP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 ZNF276Q8N554 614 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 SH3RF2Q8TEC5 729 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 SMARCD2Q92925 531 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 USP13Q92995 863 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 PLD4Q96BZ4 506 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 RPGRIP1Q96KN7 1286 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 ZFRQ96KR1 1074 aaKnown RBP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 FCRL2Q96LA5 508 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 ASB16Q96NS5 453 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 PHF7Q9BWX1 381 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 KIF9Q9HAQ2 790 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 TDP1Q9NUW8 608 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 LCMT1Q9UIC8 334 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 LSM7Q9UK45 103 aaKnown RBP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 HBS1LQ9Y450 684 aaKnown RBP14.12□□□□□ -0.15
CPNE1-227ENST00000498056 NR2E1Q9Y466 385 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 CAPN6Q9Y6Q1 641 aa14.12□□□□□ -0.15
CPNE1-227ENST00000498056 COL6A3P12111 3177 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 SOBPA7XYQ1 873 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 C2CD4DB7Z1M9 353 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 LEFTY2O00292 366 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 SPOPO43791 374 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 STC2O76061 302 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 PROSCO94903 275 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 CORO1AP31146 461 aaKnown RBP14.11□□□□□ -0.15
CPNE1-227ENST00000498056 VIPR2P41587 438 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 HADHBP55084 474 aaKnown RBP14.11□□□□□ -0.15
CPNE1-227ENST00000498056 HDAC4P56524 1084 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 COG7P83436 770 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 NNTQ13423 1086 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 PIGHQ14442 188 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-227ENST00000498056 AAK1Q2M2I8 961 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 PUS10Q3MIT2 529 aaKnown RBP14.11□□□□□ -0.15
CPNE1-227ENST00000498056 NUGGCQ68CJ6 796 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 C11orf63Q6NUN7 778 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 DAAM2Q86T65 1068 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 CPNE8Q86YQ8 564 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 C17orf53Q8N3J3 647 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-227ENST00000498056 NIPA2Q8N8Q9 360 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 TPCN2Q8NHX9 752 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 NT5C3BQ969T7 300 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 PGAP3Q96FM1 320 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-227ENST00000498056 ALS2CR12Q96Q35 445 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 KXD1Q9BQD3 176 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 KLF16Q9BXK1 252 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-227ENST00000498056 GKN1Q9NS71 199 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 HYOU1Q9Y4L1 999 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 ZFP37Q9Y6Q3 630 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-227ENST00000498056 SHROOM3Q8TF72 1996 aa14.11□□□□□ -0.15
CPNE1-227ENST00000498056 GRID2IPA4D2P6 1211 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 PRPSAP2O60256 369 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 LRCH4O75427 683 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 F9P00740 461 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 LAMP2P13473 410 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 TNNT1P13805 278 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 FCARP24071 287 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 CCR1P32246 355 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 MAN1A1P33908 653 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 DEKP35659 375 aaKnown RBP14.1□□□□□ -0.15
CPNE1-227ENST00000498056 HARS2P49590 506 aaKnown RBP14.1□□□□□ -0.15
CPNE1-227ENST00000498056 KPNA1P52294 538 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-227ENST00000498056 ZXDBP98169 803 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 TCEAL1Q15170 157 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 ZNF77Q15935 545 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 ZC3H12AQ5D1E8 599 aaKnown RBP14.1□□□□□ -0.15
CPNE1-227ENST00000498056 MTSS1LQ765P7 747 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 CCAR2Q8N163 923 aaKnown RBP14.1□□□□□ -0.15
CPNE1-227ENST00000498056 CELF5Q8N6W0 485 aaKnown RBP14.1□□□□□ -0.15
CPNE1-227ENST00000498056 RIN3Q8TB24 985 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 ADAMTS19Q8TE59 1207 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 ZWILCHQ9H900 591 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 ZFP14Q9HCL3 533 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 EPS15L1Q9UBC2 864 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 PCSK1NQ9UHG2 260 aa14.1□□□□□ -0.15
CPNE1-227ENST00000498056 GOLGA6L9A6NEM1 432 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 HEPACAM2A8MVW5 462 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 PALMO75781 387 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 IGLV3-27P01718 113 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 TCF4P15884 667 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 MIPP30301 263 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 GGCXP38435 758 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 RING1Q06587 406 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 GRM2Q14416 872 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 SMTNL2Q2TAL5 461 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 HS1BP3Q53T59 392 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 BRMS1LQ5PSV4 323 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 ZFYVE27Q5T4F4 411 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 CC2D1AQ6P1N0 951 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-227ENST00000498056 BNIPLQ7Z465 357 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 DENND1CQ8IV53 801 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 CCDC185Q8N715 623 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 ATP6V0D2Q8N8Y2 350 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 BPIFB1Q8TDL5 484 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 CENPIQ92674 756 aaPredicted RBP14.09□□□□□ -0.15
CPNE1-227ENST00000498056 FGF14Q92915 247 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 WBP2Q969T9 261 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 RSPRY1Q96DX4 576 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 PEBP4Q96S96 227 aa14.09□□□□□ -0.15
CPNE1-227ENST00000498056 TKTL2Q9H0I9 626 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms