RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SORCS1Q8WY21 1168 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 ZNF516Q92618 1163 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 GZF1Q9H116 711 aaPredicted RBP17.34■□□□□ 0.37
VIM-208ENST00000497849 FBXO44Q9H4M3 255 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 NMUR1Q9HB89 426 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 CSNK1G1Q9HCP0 422 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 ELOVL2Q9NXB9 296 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 A0A1B0GTQ1 180 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 CAPN8A6NHC0 703 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 RFPL3O75679 317 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 STC2O76061 302 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 CD27P26842 260 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 HOXD13P35453 343 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 PLA2G4AP47712 749 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 INAVAQ3KP66 663 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 PRAMEF14Q5SWL7 426 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 HES3Q5TGS1 186 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 KLHDC10Q6PID8 442 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 GPRIN1Q7Z2K8 1008 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 RDH13Q8NBN7 331 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 OR2T3Q8NH03 318 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 FGF11Q92914 225 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 SNX21Q969T3 373 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 CGRRF1Q99675 332 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 LHX5Q9H2C1 402 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 KIF3AQ9Y496 699 aa17.33■□□□□ 0.36
VIM-208ENST00000497849 ERVH48-1M5A8F1 160 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 CYP26A1O43174 497 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 SEMA4FO95754 770 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 BMP15O95972 392 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 C1SP09871 688 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 CCDC130P13994 396 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 ACADVLP49748 655 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 MAP3K7CLP57077 242 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 CXADRP78310 365 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 CAMK2GQ13555 558 aaPredicted RBP17.32■□□□□ 0.36
VIM-208ENST00000497849 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
VIM-208ENST00000497849 FBXL19Q6PCT2 694 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 SERPINA13PQ6UXR4 307 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 ANKS1BQ7Z6G8 1248 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 SPACA3Q8IXA5 215 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 CCDC127Q96BQ5 260 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 CNDP2Q96KP4 475 aaKnown RBP17.32■□□□□ 0.36
VIM-208ENST00000497849 SDCBP2Q9H190 292 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 KIAA1586Q9HCI6 787 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 PANK4Q9NVE7 773 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.32■□□□□ 0.36
VIM-208ENST00000497849 CCDC39Q9UFE4 941 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 SCML2Q9UQR0 700 aa17.32■□□□□ 0.36
VIM-208ENST00000497849 ARID1BQ8NFD5 2236 aaPredicted RBP17.31■□□□□ 0.36
VIM-208ENST00000497849 A0A1W2PQH9 124 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 H3BQV1 296 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 PYCARD-AS1I3L0S3 204 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 BRINP1O60477 761 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 FSBPO95073 299 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 LDOC1O95751 146 aaPredicted RBP17.31■□□□□ 0.36
VIM-208ENST00000497849 CDK4P11802 303 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 RARGP13631 454 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 TRPC3Q13507 836 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 PSMD6Q15008 389 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 EIF4HQ15056 248 aaKnown RBP17.31■□□□□ 0.36
VIM-208ENST00000497849 SHBQ15464 509 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 RRAGBQ5VZM2 374 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 ACOT1Q86TX2 421 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 SLC2A14Q8TDB8 520 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 HPS3Q969F9 1004 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 ELMO3Q96BJ8 720 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 TMEM176AQ96HP8 235 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 TNIP3Q96KP6 325 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 SEMA4CQ9C0C4 833 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 CIPCQ9C0C6 399 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 BTBD1Q9H0C5 482 aa17.31■□□□□ 0.36
VIM-208ENST00000497849 HHLA1C9JL84 531 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 K7ELQ4 463 aaPredicted RBP17.3■□□□□ 0.36
VIM-208ENST00000497849 DFNA5O60443 496 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 IGHV4-34P06331 123 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 ATICP31939 592 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 CYP24A1Q07973 514 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 C10orf120Q5SQS8 335 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 ADAT2Q7Z6V5 191 aaKnown RBP17.3■□□□□ 0.36
VIM-208ENST00000497849 ERICH1Q86X53 443 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 SAP25Q8TEE9 199 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 TSC1Q92574 1164 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 SYAP1Q96A49 352 aaPredicted RBP17.3■□□□□ 0.36
VIM-208ENST00000497849 ELF4Q99607 663 aaPredicted RBP17.3■□□□□ 0.36
VIM-208ENST00000497849 CLMPQ9H6B4 373 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 VRTNQ9H8Y1 702 aa17.3■□□□□ 0.36
VIM-208ENST00000497849 VILLO15195 856 aa17.29■□□□□ 0.36
VIM-208ENST00000497849 ARHGAP6O43182 974 aa17.29■□□□□ 0.36
VIM-208ENST00000497849 GJB2P29033 226 aa17.29■□□□□ 0.36
VIM-208ENST00000497849 CHKAP35790 457 aa17.29■□□□□ 0.36
VIM-208ENST00000497849 TAF1BQ53T94 588 aaPredicted RBP17.29■□□□□ 0.36
VIM-208ENST00000497849 SCARA5Q6ZMJ2 495 aa17.29■□□□□ 0.36
VIM-208ENST00000497849 FMNL3Q8IVF7 1028 aa17.29■□□□□ 0.36
VIM-208ENST00000497849 HSCBQ8IWL3 235 aa17.29■□□□□ 0.36
VIM-208ENST00000497849 ZNF366Q8N895 744 aa17.29■□□□□ 0.36
VIM-208ENST00000497849 TMEM245Q9H330 911 aa17.29■□□□□ 0.36
VIM-208ENST00000497849 HMGXB4Q9UGU5 601 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms