RNA–Protein interactions for RNA: ENST00000497057.1

PHLDA3-204, Transcript of pleckstrin homology like domain family A member 3, humanhuman

TSL 2

Gene PHLDA3, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-204ENST00000497057 TNNT1P13805 278 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 MIPP30301 263 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 GJC1P36383 396 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 HARS2P49590 506 aaKnown RBP16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 ATXN1P54253 815 aaKnown RBP16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 ARL13BQ3SXY8 428 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 ZNF569Q5MCW4 686 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 ZFYVE27Q5T4F4 411 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 OTUD1Q5VV17 481 aaPredicted RBP16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 DAB2IPQ5VWQ8 1189 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 NUGGCQ68CJ6 796 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 DDX42Q86XP3 938 aaKnown RBP eCLIP16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 UNC45BQ8IWX7 931 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 ZSCAN18Q8TBC5 510 aaPredicted RBP16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 PLD4Q96BZ4 506 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 KLF16Q9BXK1 252 aaPredicted RBP16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 IRX2Q9BZI1 471 aaPredicted RBP16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 POMKQ9H5K3 350 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 PCSK1NQ9UHG2 260 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 SLC12A6Q9UHW9 1150 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 LSM7Q9UK45 103 aaKnown RBP16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 AMFRQ9UKV5 643 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 USP18Q9UMW8 372 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 ARHGAP26Q9UNA1 814 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 SH3BP1Q9Y3L3 701 aa16.68■□□□□ 0.26
PHLDA3-204ENST00000497057 REV3LO60673 3130 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 FTCDO95954 541 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 CXCR3P49682 368 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 GNG11P61952 73 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 RING1Q06587 406 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 PPP2R5DQ14738 602 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 ODF2Q5BJF6 829 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 ZC3H12AQ5D1E8 599 aaKnown RBP16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 BRMS1LQ5PSV4 323 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 OTOP3Q7RTS5 596 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 BNIPLQ7Z465 357 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 LRRC57Q8N9N7 239 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 SUSD6Q92537 303 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 ZSWIM3Q96MP5 696 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 ADAM33Q9BZ11 813 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 TKTL2Q9H0I9 626 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 SMG9Q9H0W8 520 aaKnown RBP16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 ZWILCHQ9H900 591 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 GKN1Q9NS71 199 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 TDP1Q9NUW8 608 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 CALCOCO1Q9P1Z2 691 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 FAM50BQ9Y247 325 aa16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 ZFP37Q9Y6Q3 630 aaPredicted RBP16.67■□□□□ 0.26
PHLDA3-204ENST00000497057 GRXCR2A6NFK2 248 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 MBTPS2O43462 519 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 MOCS2O96007 188 aaPredicted RBP16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 KRT7P08729 469 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 MTA1Q13330 715 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 RAB6CQ53S08 254 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 SLFN11Q7Z7L1 901 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 CPNE8Q86YQ8 564 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 ARID3BQ8IVW6 561 aaPredicted RBP16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 RHOT1Q8IXI2 618 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 ATP6V0D2Q8N8Y2 350 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 SMARCD2Q92925 531 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 ACSF2Q96CM8 615 aaPredicted RBP16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 FCRL2Q96LA5 508 aaPredicted RBP16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 DCLK3Q9C098 648 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 RAB6CQ9H0N0 254 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 KIF9Q9HAQ2 790 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 CFAP97Q9P2B7 532 aa16.66■□□□□ 0.26
PHLDA3-204ENST00000497057 LEFTY2O00292 366 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 STC2O76061 302 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 PRAMEF12O95522 483 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 IGLV3-27P01718 113 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 WEE1P30291 646 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 CORO1AP31146 461 aaKnown RBP16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 SLC11A2P49281 568 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 KCNQ1P51787 676 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 AIF1P55008 147 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 TAS2R40P59535 323 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 PUS10Q3MIT2 529 aaKnown RBP16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 LEXMQ3ZCV2 418 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 BOLA3Q53S33 107 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 EFHC2Q5JST6 749 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 FAM78AQ5JUQ0 283 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 NT5DC3Q86UY8 548 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 ARFGAP1Q8N6T3 406 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 CELF5Q8N6W0 485 aaKnown RBP16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 UBL4BQ8N7F7 174 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 SH3RF2Q8TEC5 729 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 UBE2Q2Q8WVN8 375 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 HSPH1Q92598 858 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 USP13Q92995 863 aaPredicted RBP16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 SLC39A13Q96H72 371 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 ASB16Q96NS5 453 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 MYADMQ96S97 322 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 DENND4AQ7Z401 1863 aa16.65■□□□□ 0.26
PHLDA3-204ENST00000497057 HELZP42694 1942 aaKnown RBP16.64■□□□□ 0.26
PHLDA3-204ENST00000497057 CCDC66A2RUB6 948 aa16.64■□□□□ 0.25
PHLDA3-204ENST00000497057 MIF4GDA9UHW6 222 aaKnown RBP16.64■□□□□ 0.25
PHLDA3-204ENST00000497057 PSTPIP1O43586 416 aa16.64■□□□□ 0.25
PHLDA3-204ENST00000497057 TCF4P15884 667 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms