RNA–Protein interactions for RNA: ENST00000495517.5

RBM41-208, Transcript of RNA binding motif protein 41, human

TSL 2

Gene RBM41, Length 3,315 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM41-208	ENST00000495517	KRT3	P12035	628 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	L1CAM	P32004	1257 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	TUFM	P49411	452 aa	Known RBP	7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	GLUD2	P49448	558 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	YWHAH	Q04917	246 aa	Predicted RBP	7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	TFDP3	Q5H9I0	405 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	VARS2	Q5ST30	1063 aa	Known RBP	7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	SYCP2L	Q5T4T6	812 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	WSCD1	Q658N2	575 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	RHBDF2	Q6PJF5	856 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	MON1A	Q86VX9	555 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	PLD4	Q96BZ4	506 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	ZFP42	Q96MM3	310 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	PRMT1	Q99873	361 aa	Known RBP	7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	TMEM39A	Q9NV64	488 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	DONSON	Q9NYP3	566 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	UXT	Q9UBK9	157 aa	Predicted RBP	7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	ZNF212	Q9UDV6	495 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	PCDHB5	Q9Y5E4	795 aa		7.18	□□□□□ -1.26
RBM41-208	ENST00000495517	GOLGB1	Q14789	3259 aa	Known RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	MEIS3P2	A8K0S8	358 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	MYO1F	O00160	1098 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	FGF10	O15520	208 aa	Predicted RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	GSTA2	P09210	222 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	PDGFRB	P09619	1106 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	KLRC2	P26717	231 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	ECHS1	P30084	290 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	RDX	P35241	583 aa	Known RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	LBX1	P52954	281 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	MLLT6	P55198	1093 aa	Predicted RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	TMEM62	Q0P6H9	643 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	TRIP4	Q15650	581 aa	Predicted RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	HADH	Q16836	314 aa	Known RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	RALGPS1	Q5JS13	557 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	DUPD1	Q68J44	220 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	RETREG3	Q86VR2	466 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	ZNF558	Q96NG5	402 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	OSGEP	Q9NPF4	335 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	MTMR10	Q9NXD2	777 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	7.17	□□□□□ -1.26	4e-7	■■□□□ 13.1
RBM41-208	ENST00000495517	SPG21	Q9NZD8	308 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	GUCA1B	Q9UMX6	200 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	ZNF510	Q9Y2H8	683 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	PLXND1	Q9Y4D7	1925 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	APOC4-APOC2	K7ER74	178 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517		M0QYV0	167 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	APOC2	P02655	101 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	IL4R	P24394	825 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	LMO2	P25791	158 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	LMBRD2	Q68DH5	695 aa	Predicted RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	EMB	Q6PCB8	327 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	BZW1	Q7L1Q6	419 aa	Known RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	ZNF280B	Q86YH2	543 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	LZTR1	Q8N653	840 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	ALG3	Q92685	438 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	MYLPF	Q96A32	169 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	HEXIM2	Q96MH2	286 aa	Known RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	MTIF3	Q9H2K0	278 aa	Known RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	DPEP3	Q9H4B8	488 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	METTL5	Q9NRN9	209 aa	Known RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	DPP7	Q9UHL4	492 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	STAP1	Q9ULZ2	295 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	HES2	Q9Y543	173 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	MTMR11	A4FU01	709 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	ATF2	P15336	505 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	KDELR1	P24390	212 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	ITGB8	P26012	769 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	SCTR	P47872	440 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	CDKN1C	P49918	316 aa	Predicted RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	HDAC4	P56524	1084 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	PRKD1	Q15139	912 aa	Predicted RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	TTC31	Q49AM3	519 aa	Predicted RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	MPP7	Q5T2T1	576 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	CPXM2	Q8N436	756 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	ZNF461	Q8TAF7	563 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	NGRN	Q9NPE2	291 aa	Known RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	PRDM5	Q9NQX1	630 aa	Predicted RBP	7.17	□□□□□ -1.26
RBM41-208	ENST00000495517	FAM114A2	Q9NRY5	505 aa		7.17	□□□□□ -1.26
RBM41-208	ENST00000495517		E7ESA3	106 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517		H0YGN5	161 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	PES1	O00541	588 aa	Known RBP	7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	RASSF9	O75901	435 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	SLC34A2	O95436	690 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	RHOXF2B	P0C7M4	288 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	MAGEA3	P43357	314 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	RAP1GAP	P47736	663 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	YWHAZ	P63104	245 aa	Known RBP	7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	P3H1	Q32P28	736 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	TNFAIP8L3	Q5GJ75	292 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	WLS	Q5T9L3	541 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	LYPD8	Q6UX82	237 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	SPOCD1	Q6ZMY3	1216 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	CHST9	Q7L1S5	443 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	DAAM2	Q86T65	1068 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	NUP93	Q8N1F7	819 aa		7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	DIS3L	Q8TF46	1054 aa	Known RBP	7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.16	□□□□□ -1.26
RBM41-208	ENST00000495517	RIN2	Q8WYP3	895 aa	Predicted RBP	7.16	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms