RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 OPHN1O60890 802 aa23.14■■□□□ 1.29
HDDC3-203ENST00000494993 SLC8A3P57103 927 aa23.14■■□□□ 1.29
HDDC3-203ENST00000494993 STARD3Q14849 445 aa23.14■■□□□ 1.29
HDDC3-203ENST00000494993 FUT11Q495W5 492 aa23.14■■□□□ 1.29
HDDC3-203ENST00000494993 DENND1CQ8IV53 801 aa23.14■■□□□ 1.29
HDDC3-203ENST00000494993 CPXM2Q8N436 756 aa23.14■■□□□ 1.29
HDDC3-203ENST00000494993 MINDY1Q8N5J2 469 aa23.14■■□□□ 1.29
HDDC3-203ENST00000494993 UCMAQ8WVF2 138 aa23.14■■□□□ 1.29
HDDC3-203ENST00000494993 CCDC34Q96HJ3 373 aa23.14■■□□□ 1.29
HDDC3-203ENST00000494993 TMEM121BQ9BXQ6 578 aaPredicted RBP23.14■■□□□ 1.29
HDDC3-203ENST00000494993 AKAP13Q12802 2813 aa23.14■■□□□ 1.29
HDDC3-203ENST00000494993 SLC12A8A0AV02 714 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 CYBBP04839 570 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 IL12RB1P42701 662 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 TKTL1P51854 596 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 ZNF132P52740 706 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 ENPP2Q13822 863 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 ANKS1BQ7Z6G8 1248 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 METTL3Q86U44 580 aaKnown RBP23.13■■□□□ 1.29
HDDC3-203ENST00000494993 RGL4Q8IZJ4 473 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 FOXJ1Q92949 421 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 PIWIL1Q96J94 861 aaKnown RBP23.13■■□□□ 1.29
HDDC3-203ENST00000494993 PRDM16Q9HAZ2 1276 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 ASPMQ8IZT6 3477 aa23.13■■□□□ 1.29
HDDC3-203ENST00000494993 SPAARA0A1B0GVQ0 90 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 ZBED1O96006 694 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 SYPP08247 313 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 CD6P30203 668 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 GOLGA7BQ2TAP0 167 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 CBWD6Q4V339 395 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 DCAF17Q5H9S7 520 aaPredicted RBP23.12■■□□□ 1.29
HDDC3-203ENST00000494993 CBWD3Q5JTY5 395 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 CBWD5Q5RIA9 395 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 SYCP2LQ5T4T6 812 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 TCERG1LQ5VWI1 586 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 PM20D1Q6GTS8 502 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 BHLHA9Q7RTU4 235 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 FAM217AQ8IXS0 508 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 OR2I1PQ8NGU4 316 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 PLD4Q96BZ4 506 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 ULBP1Q9BZM6 244 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 GDPD2Q9HCC8 539 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 USP36Q9P275 1121 aaKnown RBP23.12■■□□□ 1.29
HDDC3-203ENST00000494993 SUSD2Q9UGT4 822 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 COQ4Q9Y3A0 265 aa23.12■■□□□ 1.29
HDDC3-203ENST00000494993 MUC22E2RYF6 1773 aaPredicted RBP23.12■■□□□ 1.29
HDDC3-203ENST00000494993 TULP2O00295 520 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 XPO1O14980 1071 aaKnown RBP23.11■■□□□ 1.29
HDDC3-203ENST00000494993 PRCPP42785 496 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 BCAT1P54687 386 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 SIM1P81133 766 aaPredicted RBP23.11■■□□□ 1.29
HDDC3-203ENST00000494993 PDE4CQ08493 712 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 PNOCQ13519 176 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 EIF4HQ15056 248 aaKnown RBP23.11■■□□□ 1.29
HDDC3-203ENST00000494993 E2F5Q15329 346 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 PLEKHG6Q3KR16 790 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 KDF1Q8NAX2 398 aaPredicted RBP23.11■■□□□ 1.29
HDDC3-203ENST00000494993 MKRN2Q9H000 416 aaKnown RBP23.11■■□□□ 1.29
HDDC3-203ENST00000494993 OLA1Q9NTK5 396 aaKnown RBP23.11■■□□□ 1.29
HDDC3-203ENST00000494993 DNAAF2Q9NVR5 837 aaKnown RBP23.11■■□□□ 1.29
HDDC3-203ENST00000494993 ELOVL2Q9NXB9 296 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 WSB2Q9NYS7 404 aaPredicted RBP23.11■■□□□ 1.29
HDDC3-203ENST00000494993 TSPAN16Q9UKR8 245 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 ZMIZ1Q9ULJ6 1067 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 CLEC4EQ9ULY5 219 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 NUMA1Q14980 2115 aa23.11■■□□□ 1.29
HDDC3-203ENST00000494993 SLC16A3O15427 465 aaKnown RBP23.1■■□□□ 1.29
HDDC3-203ENST00000494993 CUL2Q13617 745 aa23.1■■□□□ 1.29
HDDC3-203ENST00000494993 ZNF234Q14588 700 aa23.1■■□□□ 1.29
HDDC3-203ENST00000494993 TRIP4Q15650 581 aaPredicted RBP23.1■■□□□ 1.29
HDDC3-203ENST00000494993 WDR45BQ5MNZ6 344 aa23.1■■□□□ 1.29
HDDC3-203ENST00000494993 ZC3H3Q8IXZ2 948 aaKnown RBP23.1■■□□□ 1.29
HDDC3-203ENST00000494993 RBBP8NLQ8NC74 664 aaPredicted RBP23.1■■□□□ 1.29
HDDC3-203ENST00000494993 DDI1Q8WTU0 396 aa23.1■■□□□ 1.29
HDDC3-203ENST00000494993 NDRG1Q92597 394 aaKnown RBP23.1■■□□□ 1.29
HDDC3-203ENST00000494993 GATA6Q92908 595 aa23.1■■□□□ 1.29
HDDC3-203ENST00000494993 TOE1Q96GM8 510 aaKnown RBP23.1■■□□□ 1.29
HDDC3-203ENST00000494993 TSG101Q99816 390 aa23.1■■□□□ 1.29
HDDC3-203ENST00000494993 SLC2A11Q9BYW1 496 aa23.1■■□□□ 1.29
HDDC3-203ENST00000494993 ITM2CQ9NQX7 267 aa23.1■■□□□ 1.29
HDDC3-203ENST00000494993 RMND1Q9NWS8 449 aa23.1■■□□□ 1.29
HDDC3-203ENST00000494993 FAM208BQ5VWN6 2430 aa23.1■■□□□ 1.29
HDDC3-203ENST00000494993 HYAL3O43820 417 aaPredicted RBP23.09■■□□□ 1.29
HDDC3-203ENST00000494993 SYNCRIPO60506 623 aaKnown RBP23.09■■□□□ 1.29
HDDC3-203ENST00000494993 CD59P13987 128 aa23.09■■□□□ 1.29
HDDC3-203ENST00000494993 GNSP15586 552 aa23.09■■□□□ 1.29
HDDC3-203ENST00000494993 MAOBP27338 520 aa23.09■■□□□ 1.29
HDDC3-203ENST00000494993 BST2Q10589 180 aaKnown RBP23.09■■□□□ 1.29
HDDC3-203ENST00000494993 COBLL1Q53SF7 1204 aa23.09■■□□□ 1.29
HDDC3-203ENST00000494993 SGO2Q562F6 1265 aa23.09■■□□□ 1.29
HDDC3-203ENST00000494993 TMPRSS6Q8IU80 811 aa23.09■■□□□ 1.29
HDDC3-203ENST00000494993 CIPCQ9C0C6 399 aa23.09■■□□□ 1.29
HDDC3-203ENST00000494993 LRRC4Q9HBW1 653 aa23.09■■□□□ 1.29
HDDC3-203ENST00000494993 HESX1Q9UBX0 185 aa23.09■■□□□ 1.29
HDDC3-203ENST00000494993 NEUROG3Q9Y4Z2 214 aa23.09■■□□□ 1.29
HDDC3-203ENST00000494993 TMEM8BA6NDV4 472 aa23.08■■□□□ 1.29
HDDC3-203ENST00000494993 MEI4A8MW99 385 aa23.08■■□□□ 1.29
HDDC3-203ENST00000494993 KCNJ18B7U540 433 aa23.08■■□□□ 1.29
HDDC3-203ENST00000494993 CD19P15391 556 aa23.08■■□□□ 1.29
HDDC3-203ENST00000494993 YWHAEP62258 255 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms