RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 KAT6AQ92794 2004 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 GOLGA6L3A6NEY3 463 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 MANSC4A6NHS7 340 aaPredicted RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 SPRY2O43597 315 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 SKAP2O75563 359 aaPredicted RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 SRGAP2BP0DMP2 458 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 ITPKBP27987 946 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 DUSP1P28562 367 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 EPHB2P29323 1055 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 SLC8A1P32418 973 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 MAN1A1P33908 653 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 HTR7P34969 479 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 PTGER1P34995 402 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 DDIT3P35638 169 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 IL6STP40189 918 aaPredicted RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 CLK3P49761 638 aaKnown RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 COPB1P53618 953 aaKnown RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 ALDH18A1P54886 795 aaKnown RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 CYP4F2P78329 520 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 CFHR3Q02985 330 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 ICA1Q05084 483 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 KRTAP1-1Q07627 177 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 BFSP2Q13515 415 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 LARS2Q15031 903 aaKnown RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 ACOX1Q15067 660 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 CNGA3Q16281 694 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 FAM110CQ1W6H9 321 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 TUBB8Q3ZCM7 444 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 TMEM119Q4V9L6 283 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 ARHGAP15Q53QZ3 475 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 TMTC4Q5T4D3 741 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 MORN5Q5VZ52 161 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 ZNF813Q6ZN06 617 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 CNGA4Q8IV77 575 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 METTL25Q8N6Q8 603 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 SUN3Q8TAQ9 357 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 OSR1Q8TAX0 266 aaPredicted RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 DENND1AQ8TEH3 1009 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 IPO4Q8TEX9 1081 aaKnown RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 SMG7Q92540 1137 aaKnown RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 C18orf8Q96DM3 657 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 WDYHV1Q96HA8 205 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 TBATAQ96M53 351 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 LENG8Q96PV6 779 aaPredicted RBP2.73□□□□□ -1.97
LMNB1-207ENST00000494185 WDR24Q96S15 920 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 HTATIP2Q9BUP3 242 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 RXFP3Q9NSD7 469 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 SLC8A2Q9UPR5 921 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 PCDHB7Q9Y5E2 793 aa2.73□□□□□ -1.97
LMNB1-207ENST00000494185 ZNF804BA4D1E1 1349 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 SPATA31A1Q5TZJ5 1347 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 OR2W5A6NFC9 320 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 C3orf70A6NLC5 250 aaPredicted RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 PRRT4C9JH25 899 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 PPP6CO00743 305 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 PIP5K1BO14986 540 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 PDE8BO95263 885 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 CENPBP07199 599 aaPredicted RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 TMIGD3P0DMS9 266 aaPredicted RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 DRD1P21728 446 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 KELP23276 732 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 BDNFP23560 247 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 FPR3P25089 353 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 CASP2P42575 452 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 DIO1P49895 249 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 RPS13P62277 151 aaKnown RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 PSG6Q00889 435 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 LMAN2Q12907 356 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 SEMA3BQ13214 749 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 BLMHQ13867 455 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 TRIM14Q14142 442 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 MFSD13AQ14CX5 517 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 PUM3Q15397 648 aaKnown RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 TRIP6Q15654 476 aaKnown RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 PROSER3Q2NL68 480 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 ZNF362Q5T0B9 420 aaPredicted RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 ATPAF1Q5TC12 328 aaPredicted RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 GGT6Q6P531 493 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 LDHAL6AQ6ZMR3 332 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 MMS22LQ6ZRQ5 1243 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 RFX8Q6ZV50 586 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 MRPL10Q7Z7H8 261 aaKnown RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 NEK8Q86SG6 692 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 GALNT16Q8N428 558 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 SRFBP1Q8NEF9 429 aaKnown RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 IL17REQ8NFR9 667 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 MAFAQ8NHW3 353 aaPredicted RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 CCT6BQ92526 530 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 CTHRC1Q96CG8 243 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 GCC1Q96CN9 775 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 PRPF18Q99633 342 aaKnown RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 THAP7Q9BT49 309 aaPredicted RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 MYLK2Q9H1R3 596 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 TMEM8AQ9HCN3 771 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 GAR1Q9NY12 217 aaKnown RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 LPAR3Q9UBY5 353 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 FBXO9Q9UK97 447 aaPredicted RBP2.72□□□□□ -1.97
LMNB1-207ENST00000494185 GJD2Q9UKL4 321 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 DTNAQ9Y4J8 743 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 SIRT4Q9Y6E7 314 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms