RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CXCL8P10145 99 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 RARBP10826 455 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 ELNP15502 786 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 CYP2B6P20813 491 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 DNAJB1P25685 340 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 EPHB2P29323 1055 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 ARL4AP40617 200 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 HADHAP40939 763 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 GRM5P41594 1212 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 PRKAA2P54646 552 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 BCAT1P54687 386 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 TMPRSS15P98073 1019 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 SLC34A1Q06495 639 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 KCNT1Q5JUK3 1230 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 STEAP4Q687X5 459 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 TXNRD3NBQ6F5E7 133 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 AAGABQ6PD74 315 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 CAPN12Q6ZSI9 719 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 SH2D5Q6ZV89 423 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 SLC26A9Q7LBE3 791 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 CTAGE3PQ8IX95 158 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 ARFGAP1Q8N6T3 406 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 BEST2Q8NFU1 509 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 PIP4K2CQ8TBX8 421 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 PPP4R1Q8TF05 950 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 THOC1Q96FV9 657 aaKnown RBP11.88□□□□□ -0.51
RFC4-214ENST00000494047 HSFY1Q96LI6 401 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 ZNF560Q96MR9 790 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 PPP1R2P1Q96PQ5 205 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 FAM111AQ96PZ2 611 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 ELOVL4Q9GZR5 314 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 PCDH18Q9HCL0 1135 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 HMX1Q9NP08 348 aaPredicted RBP11.88□□□□□ -0.51
RFC4-214ENST00000494047 VTA1Q9NP79 307 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 NSMCE4AQ9NXX6 385 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 BCAP29Q9UHQ4 241 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 TAGLN3Q9UI15 199 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 SIX4Q9UIU6 781 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 TSPAN16Q9UKR8 245 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 TTLL3Q9Y4R7 772 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 ZNF236Q9UL36 1845 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 GOLGA8QA0A0J9YX86 632 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 GOLGA8OA6NCC3 632 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 LACTBL1A8MY62 500 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 GOLGA8NF8WBI6 632 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 NCAM2O15394 837 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 GSC2O15499 205 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 SMNDC1O75940 238 aaKnown RBP eCLIP11.87□□□□□ -0.51
RFC4-214ENST00000494047 ALDH1A2O94788 518 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 C22orf31O95567 290 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 CD4P01730 458 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 PYGBP11216 843 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 CYP2C9P11712 490 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 EN2P19622 333 aaPredicted RBP11.87□□□□□ -0.51
RFC4-214ENST00000494047 AXLP30530 894 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 AP2B1P63010 937 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 BST2Q10589 180 aaKnown RBP11.87□□□□□ -0.51
RFC4-214ENST00000494047 ACCSLQ4AC99 568 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 MSS51Q4VC12 460 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 EFHC1Q5JVL4 640 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 MFSD14CQ5VZR4 134 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 JADE1Q6IE81 842 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 OLFML1Q6UWY5 402 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 ADGRG6Q86SQ4 1221 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 NUDCD3Q8IVD9 361 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 KIRREL3Q8IZU9 778 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 ZNF570Q96NI8 536 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 NR1H4Q96RI1 486 aaPredicted RBP11.87□□□□□ -0.51
RFC4-214ENST00000494047 MMP19Q99542 508 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 SMYD3Q9H7B4 428 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 USP29Q9HBJ7 922 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 PAK6Q9NQU5 681 aaPredicted RBP11.87□□□□□ -0.51
RFC4-214ENST00000494047 DPP3Q9NY33 737 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 HACD3Q9P035 362 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 ZFATQ9P243 1243 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 TXNDC16Q9P2K2 825 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 PCSK1NQ9UHG2 260 aa11.87□□□□□ -0.51
RFC4-214ENST00000494047 APOBEC2Q9Y235 224 aaKnown RBP11.87□□□□□ -0.51
RFC4-214ENST00000494047 DNAJC25-GNG10A0A024R161 153 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 SLC22A2O15244 555 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 MAP3K7O43318 606 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 PEX10O60683 326 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 SNNO75324 88 aaPredicted RBP11.86□□□□□ -0.51
RFC4-214ENST00000494047 NPTXRO95502 500 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 CBX6O95503 412 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 APOA4P06727 396 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 APRTP07741 180 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 NFICP08651 508 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 MYL2P10916 166 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 PGAM1P18669 254 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 AOC1P19801 751 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 MX2P20592 715 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 ACAT1P24752 427 aaKnown RBP11.86□□□□□ -0.51
RFC4-214ENST00000494047 PRDX6P30041 224 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 PTDSS1P48651 473 aaKnown RBP11.86□□□□□ -0.51
RFC4-214ENST00000494047 RPL34P49207 117 aaKnown RBP11.86□□□□□ -0.51
RFC4-214ENST00000494047 NDST1P52848 882 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 FAAP100Q0VG06 881 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 CCDC153Q494R4 210 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 FAM183BPQ6ZVS7 135 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms