RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 MEI1Q5TIA1 1274 aa20.16■□□□□ 0.82
USP39-218ENST00000493829 CES5AQ6NT32 575 aa20.16■□□□□ 0.82
USP39-218ENST00000493829 GPR153Q6NV75 609 aa20.16■□□□□ 0.82
USP39-218ENST00000493829 BNIPLQ7Z465 357 aa20.16■□□□□ 0.82
USP39-218ENST00000493829 HSPH1Q92598 858 aa20.16■□□□□ 0.82
USP39-218ENST00000493829 SLC46A2Q9BY10 475 aa20.16■□□□□ 0.82
USP39-218ENST00000493829 ADAM7Q9H2U9 754 aa20.16■□□□□ 0.82
USP39-218ENST00000493829 WDR6Q9NNW5 1121 aaKnown RBP20.16■□□□□ 0.82
USP39-218ENST00000493829 ZNF197O14709 1029 aa20.15■□□□□ 0.82
USP39-218ENST00000493829 PAPLNO95428 1278 aa20.15■□□□□ 0.82
USP39-218ENST00000493829 PCK1P35558 622 aa20.15■□□□□ 0.82
USP39-218ENST00000493829 ATP13A4Q4VNC1 1196 aa20.15■□□□□ 0.82
USP39-218ENST00000493829 PGAP3Q96FM1 320 aaPredicted RBP20.15■□□□□ 0.82
USP39-218ENST00000493829 S1PR5Q9H228 398 aa20.15■□□□□ 0.82
USP39-218ENST00000493829 ANLNQ9NQW6 1124 aa20.15■□□□□ 0.82
USP39-218ENST00000493829 GKN1Q9NS71 199 aa20.15■□□□□ 0.82
USP39-218ENST00000493829 CPQQ9Y646 472 aa20.15■□□□□ 0.82
USP39-218ENST00000493829 ENDOD1O94919 500 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 GGCXP38435 758 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 KCNQ1P51787 676 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 COL19A1Q14993 1142 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 TRIP4Q15650 581 aaPredicted RBP20.14■□□□□ 0.81
USP39-218ENST00000493829 HADHQ16836 314 aaKnown RBP20.14■□□□□ 0.81
USP39-218ENST00000493829 CYP4V2Q6ZWL3 525 aaPredicted RBP20.14■□□□□ 0.81
USP39-218ENST00000493829 RHOT1Q8IXI2 618 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 CD101Q93033 1021 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 MSLNLQ96KJ4 702 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 FCRL2Q96LA5 508 aaPredicted RBP20.14■□□□□ 0.81
USP39-218ENST00000493829 ZSWIM3Q96MP5 696 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 SNRNP25Q9BV90 132 aaKnown RBP20.14■□□□□ 0.81
USP39-218ENST00000493829 TASP1Q9H6P5 420 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 MTMR10Q9NXD2 777 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 TLR6Q9Y2C9 796 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 JRKLQ9Y4A0 524 aa20.14■□□□□ 0.81
USP39-218ENST00000493829 ZNF500O60304 480 aaPredicted RBP20.13■□□□□ 0.81
USP39-218ENST00000493829 F9P00740 461 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 KRT1P04264 644 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 KCNA5P22460 613 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 CASQ1P31415 396 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 CTNNA1P35221 906 aaKnown RBP20.13■□□□□ 0.81
USP39-218ENST00000493829 AVPR1AP37288 418 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 CXCR3P49682 368 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 ITIH3Q06033 890 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 RPS6KA1Q15418 735 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 ATAT1Q5SQI0 421 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 KLHDC10Q6PID8 442 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 POTEHQ6S545 545 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 NAPGQ99747 312 aaPredicted RBP20.13■□□□□ 0.81
USP39-218ENST00000493829 TLR10Q9BXR5 811 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 MAGEB5Q9BZ81 275 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 TKTL2Q9H0I9 626 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 WDCPQ9H6R7 721 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.13■□□□□ 0.81
USP39-218ENST00000493829 SNX10Q9Y5X0 201 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 HELZP42694 1942 aaKnown RBP20.13■□□□□ 0.81
USP39-218ENST00000493829 CTAGE9A4FU28 777 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 PI4K2BG5E9Z4 385 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 I6L893 689 aaPredicted RBP20.13■□□□□ 0.81
USP39-218ENST00000493829 DDX3YO15523 660 aaKnown RBP20.13■□□□□ 0.81
USP39-218ENST00000493829 PSTPIP1O43586 416 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 OLFM2O95897 454 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 CCR1P32246 355 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 NPAS3Q8IXF0 933 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 ZNF276Q8N554 614 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 ST13P5Q8NFI4 369 aaPredicted RBP20.13■□□□□ 0.81
USP39-218ENST00000493829 ALG3Q92685 438 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 WBP2Q969T9 261 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 HES6Q96HZ4 224 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 ZFRQ96KR1 1074 aaKnown RBP20.13■□□□□ 0.81
USP39-218ENST00000493829 XPO7Q9UIA9 1087 aaKnown RBP20.13■□□□□ 0.81
USP39-218ENST00000493829 CD207Q9UJ71 328 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 CCL26Q9Y258 94 aa20.13■□□□□ 0.81
USP39-218ENST00000493829 PRAMEF12O95522 483 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 APOEP02649 317 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 RARAP10276 462 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 SP100P23497 879 aaPredicted RBP20.12■□□□□ 0.81
USP39-218ENST00000493829 DDX6P26196 483 aaKnown RBP eCLIP20.12■□□□□ 0.81
USP39-218ENST00000493829 CTNNA2P26232 953 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 CXCR5P32302 372 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 ZXDBP98169 803 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 EIF4EBP2Q13542 120 aaPredicted RBP20.12■□□□□ 0.81
USP39-218ENST00000493829 CA9Q16790 459 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 CMTM8Q8IZV2 173 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 PYROXD2Q8N2H3 581 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 UBL4BQ8N7F7 174 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 RIPOR3Q96MK2 946 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 KLF16Q9BXK1 252 aaPredicted RBP20.12■□□□□ 0.81
USP39-218ENST00000493829 UBE2ZQ9H832 354 aaPredicted RBP20.12■□□□□ 0.81
USP39-218ENST00000493829 AP4E1Q9UPM8 1137 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 HBS1LQ9Y450 684 aaKnown RBP20.12■□□□□ 0.81
USP39-218ENST00000493829 XIRP2A4UGR9 3374 aa20.12■□□□□ 0.81
USP39-218ENST00000493829 MIF4GDA9UHW6 222 aaKnown RBP20.11■□□□□ 0.81
USP39-218ENST00000493829 KRT7P08729 469 aa20.11■□□□□ 0.81
USP39-218ENST00000493829 ZNF211Q13398 564 aaPredicted RBP20.11■□□□□ 0.81
USP39-218ENST00000493829 LLGL1Q15334 1064 aa20.11■□□□□ 0.81
USP39-218ENST00000493829 SMRP1Q8NCR6 262 aa20.11■□□□□ 0.81
USP39-218ENST00000493829 ZSCAN18Q8TBC5 510 aaPredicted RBP20.11■□□□□ 0.81
USP39-218ENST00000493829 FGF13Q92913 245 aa20.11■□□□□ 0.81
USP39-218ENST00000493829 SLC39A13Q96H72 371 aa20.11■□□□□ 0.81
USP39-218ENST00000493829 POMKQ9H5K3 350 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms