RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 GEN1Q17RS7 908 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 DUOXA1Q1HG43 343 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 SGO2Q562F6 1265 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 BHLHA9Q7RTU4 235 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 ANKS1BQ7Z6G8 1248 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 RABEPKQ7Z6M1 372 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 DENND1CQ8IV53 801 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 ZC3H3Q8IXZ2 948 aaKnown RBP9.55□□□□□ -0.88
NFIA-213ENST00000493627 CPXM2Q8N436 756 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 TRIML1Q8N9V2 468 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 ANKRD52Q8NB46 1076 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 PLD4Q96BZ4 506 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 GTPBP2Q9BX10 602 aaKnown RBP9.55□□□□□ -0.88
NFIA-213ENST00000493627 ULBP1Q9BZM6 244 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 UBXN6Q9BZV1 441 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 SLC32A1Q9H598 525 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 CAPN10Q9HC96 672 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 AGO1Q9UL18 857 aaKnown RBP9.55□□□□□ -0.88
NFIA-213ENST00000493627 SLC6A14Q9UN76 642 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 COQ4Q9Y3A0 265 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 STON1Q9Y6Q2 735 aa9.55□□□□□ -0.88
NFIA-213ENST00000493627 TRIM49BA6NDI0 452 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 WASH3PC4AMC7 463 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 NPC1O15118 1278 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 NDUFS2O75306 463 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 ZBED1O96006 694 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 CYBBP04839 570 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 SERPINF2P08697 491 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 CD19P15391 556 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 SPINK2P20155 84 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 IL12RB1P42701 662 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 PMS1P54277 932 aaKnown RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 YWHAEP62258 255 aaKnown RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 FKBP3Q00688 224 aaKnown RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 LRRC63Q05C16 580 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 PDE4CQ08493 712 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 ADIGQ0VDE8 80 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 BST2Q10589 180 aaKnown RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 EIF4HQ15056 248 aaKnown RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 FUT11Q495W5 492 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 COBLL1Q53SF7 1204 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 ZNF658Q5TYW1 1059 aaPredicted RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 UNQ6494/PRO21346Q6UXR6 183 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 FMR1NBQ8N0W7 255 aaPredicted RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 SIX6OS1Q8N1H7 587 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 HDDC3Q8N4P3 179 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 UCMAQ8WVF2 138 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 IPO9Q96P70 1041 aaKnown RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 ADAM33Q9BZ11 813 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 MKRN2Q9H000 416 aaKnown RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 LRRC4Q9HBW1 653 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 THAP10Q9P2Z0 257 aaPredicted RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 HESX1Q9UBX0 185 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 ARMCX3Q9UH62 379 aaPredicted RBP9.54□□□□□ -0.88
NFIA-213ENST00000493627 WASF3Q9UPY6 502 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 CFAP47Q6ZTR5 3102 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 IGF2RP11717 2491 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 PCDH15Q96QU1 1955 aa9.54□□□□□ -0.88
NFIA-213ENST00000493627 C1QTNF9BB2RNN3 333 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 O00370 1275 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 ARHGAP33O14559 1287 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 SYNCRIPO60506 623 aaKnown RBP9.53□□□□□ -0.88
NFIA-213ENST00000493627 OPHN1O60890 802 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 SMC2O95347 1197 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 TOP3BO95985 862 aaKnown RBP9.53□□□□□ -0.88
NFIA-213ENST00000493627 PROS1P07225 676 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 C1QTNF9P0C862 333 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 SETSIPP0DME0 302 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 PRKCHP24723 683 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 CD6P30203 668 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 ZNF132P52740 706 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 LRMPQ12912 555 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 SEMA3BQ13214 749 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 ENPP2Q13822 863 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 ZNF234Q14588 700 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 TRIP4Q15650 581 aaPredicted RBP9.53□□□□□ -0.88
NFIA-213ENST00000493627 SYCP2LQ5T4T6 812 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 ANKRD40Q6AI12 368 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 PM20D1Q6GTS8 502 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 PIP4P1Q86T03 277 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 CACUL1Q86Y37 369 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 FMNL3Q8IVF7 1028 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 FAM217AQ8IXS0 508 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 RGL4Q8IZJ4 473 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 MINDY1Q8N5J2 469 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 UBR7Q8N806 425 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 OR2I1PQ8NGU4 316 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 DDI1Q8WTU0 396 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 RNF139Q8WU17 664 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 NDRG1Q92597 394 aaKnown RBP9.53□□□□□ -0.88
NFIA-213ENST00000493627 ERCC4Q92889 916 aaPredicted RBP9.53□□□□□ -0.88
NFIA-213ENST00000493627 FOXJ1Q92949 421 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 SMARCE1Q969G3 411 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 SLC35C1Q96A29 364 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 TOE1Q96GM8 510 aaKnown RBP9.53□□□□□ -0.88
NFIA-213ENST00000493627 ZNF419Q96HQ0 510 aaPredicted RBP9.53□□□□□ -0.88
NFIA-213ENST00000493627 PIWIL1Q96J94 861 aaKnown RBP9.53□□□□□ -0.88
NFIA-213ENST00000493627 GSDMAQ96QA5 445 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 CIPCQ9C0C6 399 aa9.53□□□□□ -0.88
NFIA-213ENST00000493627 PRDM16Q9HAZ2 1276 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms