RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 BEND5Q7L4P6 421 aa24.71■■□□□ 1.55
CTDSP1-211ENST00000492545 GBP4Q96PP9 640 aa24.71■■□□□ 1.55
CTDSP1-211ENST00000492545 ARRDC1-AS1Q9H2J1 176 aa24.71■■□□□ 1.55
CTDSP1-211ENST00000492545 LMBRD1Q9NUN5 540 aa24.71■■□□□ 1.55
CTDSP1-211ENST00000492545 SFMBT1Q9UHJ3 866 aa24.71■■□□□ 1.55
CTDSP1-211ENST00000492545 CACNA1AO00555 2505 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 PRRT4C9JH25 899 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 LETM1O95202 739 aaPredicted RBP24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 ZNF806P0C7X5 589 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 PON1P27169 355 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 GNA15P30679 374 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 MPPE1Q53F39 396 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 ADGRF1Q5T601 910 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 TOGARAM2Q6ZUX3 1019 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 UNC45BQ8IWX7 931 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 CHPFQ8IZ52 775 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 NETO1Q8TDF5 533 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 DDI1Q8WTU0 396 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 BHMTQ93088 406 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 PLK2Q9NYY3 685 aa24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 BCCIPQ9P287 314 aaKnown RBP eCLIP24.7■■□□□ 1.54
CTDSP1-211ENST00000492545 TIMM44O43615 452 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 HOXB2P14652 356 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 GBP1P32455 592 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 RING1Q06587 406 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 NUGGCQ68CJ6 796 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 DGLUCYQ7Z3D6 616 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 SHC3Q92529 594 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 AZIN2Q96A70 460 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 SPACA7Q96KW9 195 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 GABRG3Q99928 467 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 RTKNQ9BST9 563 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 SLC4A5Q9BY07 1137 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 TPSD1Q9BZJ3 242 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 ST7Q9NRC1 585 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 HCN2Q9UL51 889 aa24.69■■□□□ 1.54
CTDSP1-211ENST00000492545 TCRBV21S2A2A0A5A6 115 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 DCLK1O15075 740 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 THAP12O43422 761 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 CALCAP01258 141 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 VWA3BQ502W6 1294 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 SPDYCQ5MJ68 293 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 PLA2G2CQ5R387 149 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 EGFLAMQ63HQ2 1017 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 TMEM110Q86TL2 294 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 SCUBE3Q8IX30 993 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 UCMAQ8WVF2 138 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 MIS12Q9H081 205 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 NDST4Q9H3R1 872 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 VPS45Q9NRW7 570 aa24.68■■□□□ 1.54
CTDSP1-211ENST00000492545 PIK3R2O00459 728 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 IGLV3-27P01718 113 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 USP8P40818 1118 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 P2RY2P41231 377 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 SLC11A2P49281 568 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 NNTQ13423 1086 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 EIF4HQ15056 248 aaKnown RBP24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 ARHGAP44Q17R89 818 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 PMS2CLQ68D20 193 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 DENND1BQ6P3S1 775 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 PGBD3Q8N328 593 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 HMGB4Q8WW32 186 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 TMA16Q96EY4 203 aaKnown RBP24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 TUBGCP2Q9BSJ2 902 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 ZDHHC4Q9NPG8 344 aa24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.67■■□□□ 1.54
CTDSP1-211ENST00000492545 A0A1W2PQF6 199 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 BECN2A8MW95 431 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 IRAK2O43187 625 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 NCAM1P13591 858 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 MPLP40238 635 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 PTK2Q05397 1052 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 MPP7Q5T2T1 576 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 GJB7Q6PEY0 223 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 ANKS1BQ7Z6G8 1248 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 C12orf50Q8NA57 414 aaPredicted RBP24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 CLEC4CQ8WTT0 213 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 P2RY11Q96G91 374 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 PIWIL1Q96J94 861 aaKnown RBP24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 SERPINB11Q96P15 392 aa24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 DDX50Q9BQ39 737 aaKnown RBP24.66■■□□□ 1.54
CTDSP1-211ENST00000492545 BCLAF3A2AJT9 711 aaKnown RBP24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 GOLGA6L22H0YM25 854 aa24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 ZNF217O75362 1048 aa24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 ATXN1P54253 815 aaKnown RBP24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 TBX4P57082 545 aa24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 SNX16P57768 344 aa24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 LPCAT2Q7L5N7 544 aa24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 ZNF557Q8N988 423 aaPredicted RBP24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 IPO4Q8TEX9 1081 aaKnown RBP24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 FAM149B1Q96BN6 582 aa24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 LHX5Q9H2C1 402 aa24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 PCDHGC3Q9UN70 934 aa24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 INVSQ9Y283 1065 aa24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 TLR6Q9Y2C9 796 aa24.65■■□□□ 1.54
CTDSP1-211ENST00000492545 EML5Q05BV3 1969 aa24.64■■□□□ 1.54
CTDSP1-211ENST00000492545 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.64■■□□□ 1.54
CTDSP1-211ENST00000492545 SLC30A4O14863 429 aa24.64■■□□□ 1.54
CTDSP1-211ENST00000492545 MAP3K13O43283 966 aa24.64■■□□□ 1.54
CTDSP1-211ENST00000492545 MSI1O43347 362 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms