RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PIWIL1Q96J94 861 aaKnown RBP9.58□□□□□ -0.88
HDAC3-212ENST00000492407 HEXIM2Q96MH2 286 aaKnown RBP9.58□□□□□ -0.88
HDAC3-212ENST00000492407 ACOX2Q99424 681 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 SCNM1Q9BWG6 230 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 OLA1Q9NTK5 396 aaKnown RBP9.58□□□□□ -0.88
HDAC3-212ENST00000492407 GEMIN8Q9NWZ8 242 aaKnown RBP9.58□□□□□ -0.88
HDAC3-212ENST00000492407 RAB20Q9NX57 234 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 USP36Q9P275 1121 aaKnown RBP9.58□□□□□ -0.88
HDAC3-212ENST00000492407 STOML2Q9UJZ1 356 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 KIAA1257Q9ULG3 409 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 STON1Q9Y6Q2 735 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 SDK1Q7Z5N4 2213 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 PLXND1Q9Y4D7 1925 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 CETN3O15182 167 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 LATS1O95835 1130 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 KLKB1P03952 638 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 ZNF883P0CG24 379 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 CD58P19256 250 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 MAPK8P45983 427 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 MFAP3P55082 362 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 YWHAEP62258 255 aaKnown RBP9.57□□□□□ -0.88
HDAC3-212ENST00000492407 COBLL1Q53SF7 1204 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 KIAA1211LQ6NV74 962 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 IL27RAQ6UWB1 636 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 TOGARAM2Q6ZUX3 1019 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 ANKS1BQ7Z6G8 1248 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 SLC41A1Q8IVJ1 513 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 MINDY1Q8N5J2 469 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 PLD4Q96BZ4 506 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 HSPA12BQ96MM6 686 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 FBRSQ9HAH7 460 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 ZDHHC4Q9NPG8 344 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 CISHQ9NSE2 258 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 ELOVL2Q9NXB9 296 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 WSB2Q9NYS7 404 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-212ENST00000492407 MARCH2Q9P0N8 246 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 AGO1Q9UL18 857 aaKnown RBP9.57□□□□□ -0.88
HDAC3-212ENST00000492407 ZMIZ1Q9ULJ6 1067 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 CYP8B1Q9UNU6 501 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 COQ4Q9Y3A0 265 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 CHD6Q8TD26 2715 aa9.57□□□□□ -0.88
HDAC3-212ENST00000492407 MAP1BP46821 2468 aaKnown RBP9.57□□□□□ -0.88
HDAC3-212ENST00000492407 ATG2BQ96BY7 2078 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 A0A1B0GTW7 788 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 C1QTNF9BB2RNN3 333 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 SLC16A3O15427 465 aaKnown RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 SYNCRIPO60506 623 aaKnown RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 GJB3O75712 270 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 ZBED1O96006 694 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 C1QTNF9P0C862 333 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 TRIM49P0CI25 452 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 TRIM49CP0CI26 452 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 EPB41P11171 864 aaKnown RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 CD59P13987 128 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 CORO1AP31146 461 aaKnown RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 WASP42768 502 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 MXI1P50539 228 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 NDUFA8P51970 172 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 RAD23BP54727 409 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 YWHAGP61981 247 aaKnown RBP eCLIP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 SIM1P81133 766 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 ZBTB16Q05516 673 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 PKP1Q13835 747 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 TRIP4Q15650 581 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 FUT11Q495W5 492 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 MPPE1Q53F39 396 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 MPP7Q5T2T1 576 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 RSRC2Q7L4I2 434 aaKnown RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 GLRX5Q86SX6 157 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 PIGZQ86VD9 579 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 ZNF557Q8N988 423 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 SLC4A11Q8NBS3 891 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 RBBP8NLQ8NC74 664 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 WFIKKN2Q8TEU8 576 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 KCTD13Q8WZ19 329 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 PRCCQ92733 491 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 ELMO3Q96BJ8 720 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 NUP58Q9BVL2 599 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 GTPBP2Q9BX10 602 aaKnown RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 OSGEPQ9NPF4 335 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 RMND1Q9NWS8 449 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 CACNA2D2Q9NY47 1150 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 RASAL2Q9UJF2 1139 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 HBS1LQ9Y450 684 aaKnown RBP9.56□□□□□ -0.88
HDAC3-212ENST00000492407 ABCA7Q8IZY2 2146 aa9.56□□□□□ -0.88
HDAC3-212ENST00000492407 GOLGA6L3A6NEY3 463 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 METTL12A8MUP2 240 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 HMGB1P1B2RPK0 211 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-212ENST00000492407 XPO1O14980 1071 aaKnown RBP9.55□□□□□ -0.88
HDAC3-212ENST00000492407 MDM4O15151 490 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 PMM2O15305 246 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 ZNF202O95125 648 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 NCAM1P13591 858 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 TBXAS1P24557 533 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-212ENST00000492407 HARS2P49590 506 aaKnown RBP9.55□□□□□ -0.88
HDAC3-212ENST00000492407 TKTL1P51854 596 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 BCAT1P54687 386 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 FKBP3Q00688 224 aaKnown RBP9.55□□□□□ -0.88
HDAC3-212ENST00000492407 EFEMP1Q12805 493 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 TRIP6Q15654 476 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms