RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 EFEMP1Q12805 493 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 PDK2Q15119 407 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 P3H1Q32P28 736 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 DARS2Q6PI48 645 aaKnown RBP14.44□□□□□ -0.1
SMPD4-219ENST00000491128 SLC35B2Q8TB61 432 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 TEKT4Q8WW24 435 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 SEC14L1Q92503 715 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 NEU2Q9Y3R4 380 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 REV3LO60673 3130 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 GOLGA8MH3BSY2 632 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 MAP2K7O14733 419 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 TRIM66O15016 1216 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 GAS8O95995 478 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 HAPLN1P10915 354 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-219ENST00000491128 YWHAQP27348 245 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 CHKAP35790 457 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 ITGA8P53708 1063 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 GAD2Q05329 585 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 DHX9Q08211 1270 aaKnown RBP14.44□□□□□ -0.1
SMPD4-219ENST00000491128 GPS1Q13098 491 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 CUL1Q13616 776 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 RNF168Q8IYW5 571 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-219ENST00000491128 TTC16Q8NEE8 873 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 RNF139Q8WU17 664 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 C8orf48Q96LL4 319 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 CEP41Q9BYV8 373 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 CCSER2Q9H7U1 834 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 LRRC4CQ9HCJ2 640 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 PNPLA8Q9NP80 782 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 SPG21Q9NZD8 308 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 FBXW11Q9UKB1 542 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 HPCAL4Q9UM19 191 aa14.44□□□□□ -0.1
SMPD4-219ENST00000491128 TNFRSF8P28908 595 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 EFHC2Q5JST6 749 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 FAM109BQ6ICB4 259 aaPredicted RBP14.43□□□□□ -0.1
SMPD4-219ENST00000491128 SLC8B1Q6J4K2 584 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 ALLCQ8N6M5 410 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 KLHL23Q8NBE8 558 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 PIK3R5Q8WYR1 880 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 FMO2Q99518 471 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 ARHGEF4Q9NR80 690 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 FAM114A2Q9NRY5 505 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 ABCC13Q9NSE7 274 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 SCAMP3O14828 347 aaKnown RBP14.43□□□□□ -0.1
SMPD4-219ENST00000491128 FGF18O76093 207 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 ARHGEF15O94989 841 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 ATF2P15336 505 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 KLRC2P26717 231 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 RBL1P28749 1068 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 GLUD2P49448 558 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 FAXCQ5TGI0 409 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 NCBP2-AS2Q69YL0 99 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 LGMNQ99538 433 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 OR12D3Q9UGF7 316 aa14.43□□□□□ -0.1
SMPD4-219ENST00000491128 H3BQF6 201 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 MCF2LO15068 1137 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 ARL4AP40617 200 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 PTK6Q13882 451 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 EMBQ6PCB8 327 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 SPPL2BQ8TCT7 592 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 GRK7Q8WTQ7 553 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 UBLCP1Q8WVY7 318 aaPredicted RBP14.42□□□□□ -0.1
SMPD4-219ENST00000491128 RSAD2Q8WXG1 361 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 IRGQQ8WZA9 623 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 ZNF670Q9BS34 389 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 HOMER3Q9NSC5 361 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 SCML2Q9UQR0 700 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 SLC38A8A6NNN8 435 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 EEF2KO00418 725 aaKnown RBP14.42□□□□□ -0.1
SMPD4-219ENST00000491128 MFSD11O43934 449 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 LINC00271P0C7V0 271 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 RARGP13631 454 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 DSG1Q02413 1049 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 CALCOCO2Q13137 446 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 UAP1Q16222 522 aaPredicted RBP14.42□□□□□ -0.1
SMPD4-219ENST00000491128 SKIDA1Q1XH10 827 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 IZUMO3Q5VZ72 239 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 SLC9A4Q6AI14 798 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 RWDD4Q6NW29 188 aaKnown RBP14.42□□□□□ -0.1
SMPD4-219ENST00000491128 CMTR2Q8IYT2 770 aaKnown RBP14.42□□□□□ -0.1
SMPD4-219ENST00000491128 FIBCD1Q8N539 461 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 DEPDC1BQ8WUY9 529 aa14.42□□□□□ -0.1
SMPD4-219ENST00000491128 TEX28O15482 410 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 KCNN4O15554 427 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 IRAK2O43187 625 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 URODP06132 367 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 LAG3P18627 525 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 MAGEA11P43364 429 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 CXCR3P49682 368 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 GYS2P54840 703 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 PPIGQ13427 754 aaKnown RBP eCLIP14.41□□□□□ -0.11e-7■■■□□ 15.8
SMPD4-219ENST00000491128 TFDP2Q14188 446 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 NOMO1Q15155 1222 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 C10orf120Q5SQS8 335 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 RFX8Q6ZV50 586 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 MON1AQ86VX9 555 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 CCDC89Q8N998 374 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 ZNF461Q8TAF7 563 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 DPF3Q92784 378 aa14.41□□□□□ -0.1
SMPD4-219ENST00000491128 NKD2Q969F2 451 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms