RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PDE4CQ08493 712 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 BST2Q10589 180 aaKnown RBP20.65■□□□□ 0.9
SREBF1-216ENST00000490796 COBLL1Q53SF7 1204 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 SLC23A3Q6PIS1 610 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 RGL4Q8IZJ4 473 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 HDDC3Q8N4P3 179 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 PLD4Q96BZ4 506 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 GTPBP2Q9BX10 602 aaKnown RBP20.65■□□□□ 0.9
SREBF1-216ENST00000490796 METTL14Q9HCE5 456 aaKnown RBP20.65■□□□□ 0.9
SREBF1-216ENST00000490796 FBXO10Q9UK96 956 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 COQ4Q9Y3A0 265 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 STON1Q9Y6Q2 735 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 SYNCRIPO60506 623 aaKnown RBP20.64■□□□□ 0.89
SREBF1-216ENST00000490796 MFAP3P55082 362 aa20.64■□□□□ 0.89
SREBF1-216ENST00000490796 NUCB2P80303 420 aa20.64■□□□□ 0.89
SREBF1-216ENST00000490796 CETN1Q12798 172 aa20.64■□□□□ 0.89
SREBF1-216ENST00000490796 SYCP2LQ5T4T6 812 aa20.64■□□□□ 0.89
SREBF1-216ENST00000490796 FYB2Q5VWT5 728 aa20.64■□□□□ 0.89
SREBF1-216ENST00000490796 ANKS1BQ7Z6G8 1248 aa20.64■□□□□ 0.89
SREBF1-216ENST00000490796 KIAA1257Q9ULG3 409 aa20.64■□□□□ 0.89
SREBF1-216ENST00000490796 WASH3PC4AMC7 463 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 VDRP11473 427 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 ZNF132P52740 706 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 ADIGQ0VDE8 80 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 FOXC1Q12948 553 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 CCDC40Q4G0X9 1142 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 PM20D1Q6GTS8 502 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 FMNL3Q8IVF7 1028 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 CPXM2Q8N436 756 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 TRIML1Q8N9V2 468 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 DEFB124Q8NES8 71 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 UBA3Q8TBC4 463 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 ERCC4Q92889 916 aaPredicted RBP20.63■□□□□ 0.89
SREBF1-216ENST00000490796 MRGPRX1Q96LB2 322 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 HSPA12BQ96MM6 686 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 CIPCQ9C0C6 399 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 ASCC3Q8N3C0 2202 aaKnown RBP20.63■□□□□ 0.89
SREBF1-216ENST00000490796 PLXND1Q9Y4D7 1925 aa20.63■□□□□ 0.89
SREBF1-216ENST00000490796 TRIM49BA6NDI0 452 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 KRT37O76014 449 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 SYPP08247 313 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 SERPINF2P08697 491 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 SETSIPP0DME0 302 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 PPP1R2P41236 205 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 PMS1P54277 932 aaKnown RBP20.62■□□□□ 0.89
SREBF1-216ENST00000490796 GEN1Q17RS7 908 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 MPPE1Q53F39 396 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 ZC3H3Q8IXZ2 948 aaKnown RBP20.62■□□□□ 0.89
SREBF1-216ENST00000490796 NDRG1Q92597 394 aaKnown RBP20.62■□□□□ 0.89
SREBF1-216ENST00000490796 FOXJ1Q92949 421 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 TIGD1Q96MW7 591 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 NT5C1BQ96P26 610 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 SLC2A11Q9BYW1 496 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 SLC6A17Q9H1V8 727 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 PRDM16Q9HAZ2 1276 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 THAP10Q9P2Z0 257 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-216ENST00000490796 HBS1LQ9Y450 684 aaKnown RBP20.62■□□□□ 0.89
SREBF1-216ENST00000490796 PCDHB4Q9Y5E5 795 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 GTF3C3Q9Y5Q9 886 aa20.62■□□□□ 0.89
SREBF1-216ENST00000490796 TULP2O00295 520 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 GNSP15586 552 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 EIF4HQ15056 248 aaKnown RBP20.61■□□□□ 0.89
SREBF1-216ENST00000490796 FUT11Q495W5 492 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 WDR45BQ5MNZ6 344 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 PEAR1Q5VY43 1037 aaPredicted RBP20.61■□□□□ 0.89
SREBF1-216ENST00000490796 BSPRYQ5W0U4 402 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 ISM2Q6H9L7 571 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 TMEM270Q6UE05 265 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 EDEM1Q92611 657 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 GOLGA1Q92805 767 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 SLC35C1Q96A29 364 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 DHTKD1Q96HY7 919 aaPredicted RBP20.61■□□□□ 0.89
SREBF1-216ENST00000490796 ABCC13Q9NSE7 274 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 ELOVL2Q9NXB9 296 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 SUSD2Q9UGT4 822 aa20.61■□□□□ 0.89
SREBF1-216ENST00000490796 TIMM44O43615 452 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 TSPAN3O60637 253 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 OPHN1O60890 802 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 ACADMP11310 421 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 LCP1P13796 627 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 CD6P30203 668 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 IL12RB1P42701 662 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 FMO5P49326 533 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 ZNF445P59923 1031 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 TRIP4Q15650 581 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-216ENST00000490796 SLC41A1Q8IVJ1 513 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 PPM1KQ8N3J5 372 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 ENGASEQ8NFI3 743 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 CEP63Q96MT8 703 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 CD248Q9HCU0 757 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 FSCN3Q9NQT6 498 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 CNGB3Q9NQW8 809 aa20.6■□□□□ 0.89
SREBF1-216ENST00000490796 MEI4A8MW99 385 aa20.59■□□□□ 0.89
SREBF1-216ENST00000490796 O00370 1275 aa20.59■□□□□ 0.89
SREBF1-216ENST00000490796 PAEPP09466 180 aa20.59■□□□□ 0.89
SREBF1-216ENST00000490796 ZNF234Q14588 700 aa20.59■□□□□ 0.89
SREBF1-216ENST00000490796 KLHL10Q6JEL2 608 aa20.59■□□□□ 0.89
SREBF1-216ENST00000490796 SERPINA13PQ6UXR4 307 aa20.59■□□□□ 0.89
SREBF1-216ENST00000490796 SPATA20Q8TB22 786 aa20.59■□□□□ 0.89
SREBF1-216ENST00000490796 KCTD13Q8WZ19 329 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms