RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 MSANTD2Q6P1R3 559 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 DENND1BQ6P3S1 775 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 C11orf74Q86VG3 221 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 CHPFQ8IZ52 775 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 OLIG1Q8TAK6 271 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 GOLGA1Q92805 767 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 ST7Q9NRC1 585 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 LMBRD1Q9NUN5 540 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 DACH1Q9UI36 760 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 SLC27A6Q9Y2P4 619 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 THADAQ6YHU6 1953 aa32.74■■■□□ 2.83
LDB1-204ENST00000490751 DNAH14Q0VDD8 3507 aa32.74■■■□□ 2.83
LDB1-204ENST00000490751 GTPBP10A4D1E9 387 aaKnown RBP32.74■■■□□ 2.83
LDB1-204ENST00000490751 MED7O43513 233 aa32.74■■■□□ 2.83
LDB1-204ENST00000490751 BCKDHBP21953 392 aa32.74■■■□□ 2.83
LDB1-204ENST00000490751 GNA15P30679 374 aa32.74■■■□□ 2.83
LDB1-204ENST00000490751 PGBD3Q8N328 593 aa32.74■■■□□ 2.83
LDB1-204ENST00000490751 ZNF606Q8WXB4 792 aa32.74■■■□□ 2.83
LDB1-204ENST00000490751 ACP6Q9NPH0 428 aa32.74■■■□□ 2.83
LDB1-204ENST00000490751 ABCA7Q8IZY2 2146 aa32.74■■■□□ 2.83
LDB1-204ENST00000490751 THAP12O43422 761 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 FOXD2O60548 495 aaPredicted RBP32.73■■■□□ 2.83
LDB1-204ENST00000490751 PON1P27169 355 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 ERCC5P28715 1186 aaPredicted RBP32.73■■■□□ 2.83
LDB1-204ENST00000490751 MPLP40238 635 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 FOXK2Q01167 660 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 MAN2A1Q16706 1144 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 PMS2CLQ68D20 193 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 SDE2Q6IQ49 451 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 FAM114A1Q8IWE2 563 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 DDI1Q8WTU0 396 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 RLN3Q8WXF3 142 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 PLXND1Q9Y4D7 1925 aa32.73■■■□□ 2.83
LDB1-204ENST00000490751 LOC105378220A0A1B0GUY1 285 aaPredicted RBP32.72■■■□□ 2.83
LDB1-204ENST00000490751 BECN2A8MW95 431 aa32.72■■■□□ 2.83
LDB1-204ENST00000490751 USP8P40818 1118 aa32.72■■■□□ 2.83
LDB1-204ENST00000490751 RPL34P49207 117 aaKnown RBP32.72■■■□□ 2.83
LDB1-204ENST00000490751 SF3A2Q15428 464 aaKnown RBP32.72■■■□□ 2.83
LDB1-204ENST00000490751 MEA1Q16626 185 aa32.72■■■□□ 2.83
LDB1-204ENST00000490751 NETO1Q8TDF5 533 aa32.72■■■□□ 2.83
LDB1-204ENST00000490751 A0A1W2PQF6 199 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 ZNF806P0C7X5 589 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 P2RY2P41231 377 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 ATXN1P54253 815 aaKnown RBP32.71■■■□□ 2.83
LDB1-204ENST00000490751 CREB5Q02930 508 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 GEN1Q17RS7 908 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 PLA2G2CQ5R387 149 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 SCUBE3Q8IX30 993 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 SPACA7Q96KW9 195 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 CACNA2D2Q9NY47 1150 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 STOML2Q9UJZ1 356 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 CLEC4EQ9ULY5 219 aa32.71■■■□□ 2.83
LDB1-204ENST00000490751 NUP205Q92621 2012 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 GDF9O60383 454 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 TSPAN3O60637 253 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 LATS1O95835 1130 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 GABRG2P18507 467 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 ACADSBP45954 432 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 MPPE1Q53F39 396 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 HSP90AA4PQ58FG1 418 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 C12orf50Q8NA57 414 aaPredicted RBP32.7■■■□□ 2.83
LDB1-204ENST00000490751 SHC3Q92529 594 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 GABRG3Q99928 467 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 SMOC1Q9H4F8 434 aa32.7■■■□□ 2.83
LDB1-204ENST00000490751 SART1O43290 800 aaKnown RBP32.69■■■□□ 2.82
LDB1-204ENST00000490751 NCAM1P13591 858 aa32.69■■■□□ 2.82
LDB1-204ENST00000490751 AASDHQ4L235 1098 aaPredicted RBP32.69■■■□□ 2.82
LDB1-204ENST00000490751 STK32AQ8WU08 396 aa32.69■■■□□ 2.82
LDB1-204ENST00000490751 FAM149B1Q96BN6 582 aa32.69■■■□□ 2.82
LDB1-204ENST00000490751 ERLEC1Q96DZ1 483 aa32.69■■■□□ 2.82
LDB1-204ENST00000490751 PIWIL1Q96J94 861 aaKnown RBP32.69■■■□□ 2.82
LDB1-204ENST00000490751 RTKNQ9BST9 563 aa32.69■■■□□ 2.82
LDB1-204ENST00000490751 SLC4A5Q9BY07 1137 aa32.69■■■□□ 2.82
LDB1-204ENST00000490751 SLC2A11Q9BYW1 496 aa32.69■■■□□ 2.82
LDB1-204ENST00000490751 SIX2Q9NPC8 291 aa32.69■■■□□ 2.82
LDB1-204ENST00000490751 CYTH4Q9UIA0 394 aa32.69■■■□□ 2.82
LDB1-204ENST00000490751 AJAP1Q9UKB5 411 aaPredicted RBP32.69■■■□□ 2.82
LDB1-204ENST00000490751 CACNA1AO00555 2505 aa32.69■■■□□ 2.82
LDB1-204ENST00000490751 IGLV3-27P01718 113 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 FYNP06241 537 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 PRKCSHP14314 528 aaPredicted RBP32.68■■■□□ 2.82
LDB1-204ENST00000490751 ZNF445P59923 1031 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 MAP7D1Q3KQU3 841 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 ADGRF1Q5T601 910 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 KIAA1211LQ6NV74 962 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 ANKS1BQ7Z6G8 1248 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 FRMD1Q8N878 549 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 IPO4Q8TEX9 1081 aaKnown RBP32.68■■■□□ 2.82
LDB1-204ENST00000490751 TUBGCP2Q9BSJ2 902 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 NDST4Q9H3R1 872 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 CD248Q9HCU0 757 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 VPS45Q9NRW7 570 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 RAD54BQ9Y620 910 aa32.68■■■□□ 2.82
LDB1-204ENST00000490751 BCLAF3A2AJT9 711 aaKnown RBP32.67■■■□□ 2.82
LDB1-204ENST00000490751 E5RJQ4 531 aa32.67■■■□□ 2.82
LDB1-204ENST00000490751 GFRA2O00451 464 aa32.67■■■□□ 2.82
LDB1-204ENST00000490751 HOXD9P28356 352 aaPredicted RBP32.67■■■□□ 2.82
LDB1-204ENST00000490751 TBX4P57082 545 aa32.67■■■□□ 2.82
LDB1-204ENST00000490751 BYSLQ13895 437 aaKnown RBP32.67■■■□□ 2.82
LDB1-204ENST00000490751 VWA3BQ502W6 1294 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms