RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 NAGLUP54802 743 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 MOGSQ13724 837 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 PHF13Q86YI8 300 aaPredicted RBP13.2□□□□□ -0.3
SHOX2-205ENST00000490689 RTKN2Q8IZC4 609 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 BSNDQ8WZ55 320 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 ERLEC1Q96DZ1 483 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 ELMO2Q96JJ3 720 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 CCDC167Q9P0B6 97 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 A6NHS1 94 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 CXCL8P10145 99 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 TM4SF1P30408 202 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 ETFBP38117 255 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 TNFSF9P41273 254 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 SULT1E1P49888 294 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 GPX6P59796 221 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 DLG1Q12959 904 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 KRT72Q14CN4 511 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
SHOX2-205ENST00000490689 GLRA4Q5JXX5 417 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 DCAF15Q66K64 600 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 ZNF513Q8N8E2 541 aaPredicted RBP13.2□□□□□ -0.3
SHOX2-205ENST00000490689 TRIM15Q9C019 465 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 ZNF518BQ9C0D4 1074 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 SPC25Q9HBM1 224 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 SUN2Q9UH99 717 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 SNX5Q9Y5X3 404 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 ASTN2O75129 1339 aaPredicted RBP13.2□□□□□ -0.3
SHOX2-205ENST00000490689 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 PHGDHO43175 533 aaKnown RBP13.2□□□□□ -0.3
SHOX2-205ENST00000490689 MAGEC1O60732 1142 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 TOP3BO95985 862 aaKnown RBP13.2□□□□□ -0.3
SHOX2-205ENST00000490689 OATP04181 439 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 BPGMP07738 259 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 PGM5Q15124 567 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 TRIM16LQ309B1 348 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 ITPRIPL1Q6GPH6 555 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 TDRPQ86YL5 185 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 TSPAN14Q8NG11 270 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 CD101Q93033 1021 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 MBOAT7Q96N66 472 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 P2RX7Q99572 595 aaKnown RBP13.2□□□□□ -0.3
SHOX2-205ENST00000490689 PTPRHQ9HD43 1115 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 RRN3Q9NYV6 651 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 LNPEPQ9UIQ6 1025 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 C1orf232A0A0U1RR37 186 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 T-ENOLP0DO92 83 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 GNAZP19086 355 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 NSUN2Q08J23 767 aaKnown RBP eCLIP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 DGKZQ13574 1117 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 FUT11Q495W5 492 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 PPM1JQ5JR12 505 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 DPY19L2Q6NUT2 758 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 CLEC4FQ8N1N0 589 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 PQLC1Q8N2U9 271 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 RCN3Q96D15 328 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 ZFRQ96KR1 1074 aaKnown RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 PANX3Q96QZ0 392 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 RNF19AQ9NV58 838 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 BAG5Q9UL15 447 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 TDRKHQ9Y2W6 561 aaKnown RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 F8W8V4 182 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 DFFAO00273 331 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 TRIM13O60858 407 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 ATP6V1G1O75348 118 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 SRP72O76094 671 aaKnown RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 PIGNO95427 931 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 UNGP13051 313 aaPredicted RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 HSPA13P48723 471 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 PLK1P53350 603 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 ACTR3P61158 418 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 PDK1Q15118 436 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 FAM156AQ8NDB6 213 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 NCLNQ969V3 563 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 DCUN1D1Q96GG9 259 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 FRMD8P1Q9BZ68 369 aaPredicted RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 WDR41Q9HAD4 459 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 XPNPEP3Q9NQH7 507 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 C5P01031 1676 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 SIN3BO75182 1162 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 ZNF189O75820 626 aaPredicted RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 CST3P01034 146 aaPredicted RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 FDFT1P37268 417 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 MAPRE2Q15555 327 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 TRMT10BQ6PF06 316 aaKnown RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 CATSPER4Q7RTX7 472 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 TREML1Q86YW5 311 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 CCDC60Q8IWA6 550 aaPredicted RBP13.19□□□□□ -0.3
SHOX2-205ENST00000490689 IPMKQ8NFU5 416 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 BORCS6Q96GS4 357 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 CDH22Q9UJ99 828 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 CNTNAP2Q9UHC6 1331 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 PDE4DIPQ5VU43 2346 aa13.19□□□□□ -0.3
SHOX2-205ENST00000490689 KLHL33A6NCF5 533 aa13.18□□□□□ -0.3
SHOX2-205ENST00000490689 E5RJQ4 531 aa13.18□□□□□ -0.3
SHOX2-205ENST00000490689 WDR46O15213 610 aaKnown RBP13.18□□□□□ -0.3
SHOX2-205ENST00000490689 MAP3K13O43283 966 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms