RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ANKRD52Q8NB46 1076 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 TCEAL3Q969E4 200 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 GABRG3Q99928 467 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 SLC2A11Q9BYW1 496 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 SMOC1Q9H4F8 434 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 THAP9Q9H5L6 903 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 CISHQ9NSE2 258 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 HESX1Q9UBX0 185 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 FBXO10Q9UK96 956 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 KIAA1257Q9ULG3 409 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 INVSQ9Y283 1065 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 NFE2L3Q9Y4A8 694 aa10.86□□□□□ -0.67
TTC28-207ENST00000490475 ASCC3Q8N3C0 2202 aaKnown RBP10.86□□□□□ -0.67
TTC28-207ENST00000490475 LAMA1P25391 3075 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 CEP295Q9C0D2 2601 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 UPK3BL1B0FP48 263 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 UPK3BL2E5RIL1 263 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 NDUFS2O75306 463 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 STC2O76061 302 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 TBX18O95935 607 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 SYPP08247 313 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 SERPINF2P08697 491 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 GNSP15586 552 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 GABRG2P18507 467 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 MTIF2P46199 727 aaKnown RBP10.85□□□□□ -0.67
TTC28-207ENST00000490475 BCAT1P54687 386 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 IRX4P78413 519 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 MESP2Q0VG99 397 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 RAB41Q5JT25 222 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 GPRIN1Q7Z2K8 1008 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 MIB1Q86YT6 1006 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 TMEFF1Q8IYR6 380 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 CPXM2Q8N436 756 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 HDDC3Q8N4P3 179 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 ZNF557Q8N988 423 aaPredicted RBP10.85□□□□□ -0.67
TTC28-207ENST00000490475 ENOX1Q8TC92 643 aaKnown RBP10.85□□□□□ -0.67
TTC28-207ENST00000490475 IPO4Q8TEX9 1081 aaKnown RBP10.85□□□□□ -0.67
TTC28-207ENST00000490475 RLN3Q8WXF3 142 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 JAKMIP2Q96AA8 810 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 PLD4Q96BZ4 506 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 CRACR2AQ9BSW2 395 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 IRX2Q9BZI1 471 aaPredicted RBP10.85□□□□□ -0.67
TTC28-207ENST00000490475 ANO10Q9NW15 660 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 CALCOCO1Q9P1Z2 691 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 PILRBQ9UKJ0 227 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 SLC6A14Q9UN76 642 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 TNRC6BQ9UPQ9 1833 aaKnown RBP10.85□□□□□ -0.67
TTC28-207ENST00000490475 CACNA1EQ15878 2313 aa10.85□□□□□ -0.67
TTC28-207ENST00000490475 KMT2BQ9UMN6 2715 aaPredicted RBP10.85□□□□□ -0.67
TTC28-207ENST00000490475 A0A1W2PQF6 199 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 CDX4O14627 284 aaPredicted RBP10.84□□□□□ -0.67
TTC28-207ENST00000490475 XPO1O14980 1071 aaKnown RBP10.84□□□□□ -0.67
TTC28-207ENST00000490475 P4HA2O15460 535 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 LATS1O95835 1130 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 ZBED1O96006 694 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 PENKP01210 267 aaPredicted RBP10.84□□□□□ -0.67
TTC28-207ENST00000490475 CFIP05156 583 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 HARS2P49590 506 aaKnown RBP10.84□□□□□ -0.67
TTC28-207ENST00000490475 YWHAGP61981 247 aaKnown RBP eCLIP10.84□□□□□ -0.67
TTC28-207ENST00000490475 APBA1Q02410 837 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 ARID5AQ03989 594 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 TYRO3Q06418 890 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 ZNF33AQ06730 810 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 PDE4CQ08493 712 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 BST2Q10589 180 aaKnown RBP10.84□□□□□ -0.67
TTC28-207ENST00000490475 CUL2Q13617 745 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 STILQ15468 1287 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 STX1AQ16623 288 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 KLHL40Q2TBA0 621 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 SGO2Q562F6 1265 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 WDR45BQ5MNZ6 344 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 SH3PXD2AQ5TCZ1 1133 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 EGFLAMQ63HQ2 1017 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 PM20D1Q6GTS8 502 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 RRAGAQ7L523 313 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 ANKS1BQ7Z6G8 1248 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 ARHGEF19Q8IW93 802 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 SFTPA1Q8IWL2 248 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 SCML4Q8N228 414 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 SLC4A11Q8NBS3 891 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 RNF139Q8WU17 664 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 KAT5Q92993 513 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 ZDHHC5Q9C0B5 715 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 INTS2Q9H0H0 1204 aaKnown RBP10.84□□□□□ -0.67
TTC28-207ENST00000490475 NMUR1Q9HB89 426 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 LRRC4Q9HBW1 653 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 FANCLQ9NW38 375 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 OSER1Q9NX31 292 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 MARCH2Q9P0N8 246 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 MBD1Q9UIS9 605 aaPredicted RBP10.84□□□□□ -0.67
TTC28-207ENST00000490475 RASAL2Q9UJF2 1139 aa10.84□□□□□ -0.67
TTC28-207ENST00000490475 HBS1LQ9Y450 684 aaKnown RBP10.84□□□□□ -0.67
TTC28-207ENST00000490475 IGHV1OR15-9A0A0B4J2B8 117 aa10.83□□□□□ -0.68
TTC28-207ENST00000490475 TMEM8BA6NDV4 472 aa10.83□□□□□ -0.68
TTC28-207ENST00000490475 KCNJ18B7U540 433 aa10.83□□□□□ -0.68
TTC28-207ENST00000490475 H0Y626 953 aa10.83□□□□□ -0.68
TTC28-207ENST00000490475 SYNCRIPO60506 623 aaKnown RBP10.83□□□□□ -0.68
TTC28-207ENST00000490475 OPHN1O60890 802 aa10.83□□□□□ -0.68
TTC28-207ENST00000490475 TRIM16O95361 564 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms