RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PRDM16Q9HAZ2 1276 aa14.71□□□□□ -0.05
VPS26A-205ENST00000489656 PCDH18Q9HCL0 1135 aa14.71□□□□□ -0.05
VPS26A-205ENST00000489656 HOMER3Q9NSC5 361 aa14.71□□□□□ -0.05
VPS26A-205ENST00000489656 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.71□□□□□ -0.05
VPS26A-205ENST00000489656 MTMR10Q9NXD2 777 aa14.71□□□□□ -0.05
VPS26A-205ENST00000489656 ARHGEF38Q9NXL2 777 aa14.71□□□□□ -0.05
VPS26A-205ENST00000489656 MAGED2Q9UNF1 606 aaPredicted RBP14.71□□□□□ -0.05
VPS26A-205ENST00000489656 TLR6Q9Y2C9 796 aa14.71□□□□□ -0.05
VPS26A-205ENST00000489656 CHD5Q8TDI0 1954 aa14.71□□□□□ -0.06
VPS26A-205ENST00000489656 TCRBV7S2A1N4TA0A589 114 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 ZNF840PA6NDX5 716 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 CLASP2O75122 1294 aaKnown RBP14.7□□□□□ -0.06
VPS26A-205ENST00000489656 PHF2O75151 1096 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 LRG1P02750 347 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 POU2F2P09086 479 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 CD48P09326 243 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 IL4RP24394 825 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 HOXA9P31269 272 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 KRT81Q14533 505 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 TAF12Q16514 161 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 CA9Q16790 459 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 GLE1Q53GS7 698 aaKnown RBP14.7□□□□□ -0.06
VPS26A-205ENST00000489656 EFHC2Q5JST6 749 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 BBS12Q6ZW61 710 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 PRELID2Q8N945 189 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 MICAL1Q8TDZ2 1067 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 UBXN4Q92575 508 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 DCBLD2Q96PD2 775 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 KCTD15Q96SI1 283 aaPredicted RBP14.7□□□□□ -0.06
VPS26A-205ENST00000489656 AP1M1Q9BXS5 423 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 SLITRK6Q9H5Y7 841 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 DHX35Q9H5Z1 703 aaKnown RBP14.7□□□□□ -0.06
VPS26A-205ENST00000489656 WDCPQ9H6R7 721 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 GPATCH2LQ9NWQ4 482 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 TRPM5Q9NZQ8 1165 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 NR2E1Q9Y466 385 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 SHROOM3Q8TF72 1996 aa14.7□□□□□ -0.06
VPS26A-205ENST00000489656 SYNJ2BP-COX16A0A087WUM0 186 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 TLR5O60602 858 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 IGLV3-27P01718 113 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 F11P03951 625 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 SPATA31D3P0C874 917 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 SLC2A3P11169 496 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 KRT10P13645 584 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 CCR1P32246 355 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 CHRNA3P32297 505 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 KPNA1P52294 538 aaPredicted RBP14.69□□□□□ -0.06
VPS26A-205ENST00000489656 SMAD3P84022 425 aaKnown RBP14.69□□□□□ -0.06
VPS26A-205ENST00000489656 RING1Q06587 406 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 SEMA3BQ13214 749 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 MTA1Q13330 715 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 TFDP2Q14188 446 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 TRIP4Q15650 581 aaPredicted RBP14.69□□□□□ -0.06
VPS26A-205ENST00000489656 PABPC1LQ4VXU2 614 aaKnown RBP14.69□□□□□ -0.06
VPS26A-205ENST00000489656 TEX35Q5T0J7 233 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 HECTD3Q5T447 861 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 SPATA31D4Q6ZUB0 917 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 ZNF512Q96ME7 567 aaPredicted RBP14.69□□□□□ -0.06
VPS26A-205ENST00000489656 RUNDC3BQ96NL0 473 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 RNF157Q96PX1 679 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 HAPLN3Q96S86 360 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 CALN1Q9BXU9 219 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 LRRC3Q9BY71 257 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 FRMD8P1Q9BZ68 369 aaPredicted RBP14.69□□□□□ -0.06
VPS26A-205ENST00000489656 TKTL2Q9H0I9 626 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 OSBPL2Q9H1P3 480 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 PRO3102Q9H379 93 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 LRRC19Q9H756 370 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 SLC28A3Q9HAS3 691 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 IL21Q9HBE4 155 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 COX16Q9P0S2 106 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 SFMBT1Q9UHJ3 866 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 DPP7Q9UHL4 492 aa14.69□□□□□ -0.06
VPS26A-205ENST00000489656 HBS1LQ9Y450 684 aaKnown RBP14.69□□□□□ -0.06
VPS26A-205ENST00000489656 RANBP2P49792 3224 aaKnown RBP14.69□□□□□ -0.06
VPS26A-205ENST00000489656 UQCRHLA0A096LP55 91 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 KCNU1A8MYU2 1149 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 I6L893 689 aaPredicted RBP14.68□□□□□ -0.06
VPS26A-205ENST00000489656 ZMYND10O75800 440 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 PAPLNO95428 1278 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 UQCRHP07919 91 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 HNRNPA1P09651 372 aaKnown RBP eCLIP14.68□□□□□ -0.06
VPS26A-205ENST00000489656 HTR7P34969 479 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 ATP5C1P36542 298 aaKnown RBP14.68□□□□□ -0.06
VPS26A-205ENST00000489656 HCAR3P49019 387 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 FNTAP49354 379 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 EPHA5P54756 1037 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 NRG1Q02297 640 aaPredicted RBP14.68□□□□□ -0.06
VPS26A-205ENST00000489656 ADCY2Q08462 1091 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 EFEMP1Q12805 493 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 CCNG2Q16589 344 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 ERCC6LQ2NKX8 1250 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 ANKRD20A8PQ5CZ79 823 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 PPM1LQ5SGD2 360 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 C10orf120Q5SQS8 335 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 ACBD5Q5T8D3 534 aaPredicted RBP14.68□□□□□ -0.06
VPS26A-205ENST00000489656 SLC9A4Q6AI14 798 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 CCDC70Q6NSX1 233 aa14.68□□□□□ -0.06
VPS26A-205ENST00000489656 DRICH1Q6PGQ1 229 aaPredicted RBP14.68□□□□□ -0.06
VPS26A-205ENST00000489656 ADAT2Q7Z6V5 191 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms