RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 FUT11Q495W5 492 aa19.31■□□□□ 0.68
HDAC6-231ENST00000488905 RSRC2Q7L4I2 434 aaKnown RBP19.31■□□□□ 0.68
HDAC6-231ENST00000488905 ANKS1BQ7Z6G8 1248 aa19.31■□□□□ 0.68
HDAC6-231ENST00000488905 ZNF419Q96HQ0 510 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-231ENST00000488905 UBXN6Q9BZV1 441 aa19.31■□□□□ 0.68
HDAC6-231ENST00000488905 AGO1Q9UL18 857 aaKnown RBP19.31■□□□□ 0.68
HDAC6-231ENST00000488905 STRIP2Q9ULQ0 834 aa19.31■□□□□ 0.68
HDAC6-231ENST00000488905 NUMA1Q14980 2115 aa19.31■□□□□ 0.68
HDAC6-231ENST00000488905 PKD1L2Q7Z442 2459 aa19.31■□□□□ 0.68
HDAC6-231ENST00000488905 LAMA5O15230 3695 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 SPAARA0A1B0GVQ0 90 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 NPC1O15118 1278 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 ZNF202O95125 648 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 CD6P30203 668 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 IL12RB1P42701 662 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 SLC8A3P57103 927 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 YWHAGP61981 247 aaKnown RBP eCLIP19.3■□□□□ 0.68
HDAC6-231ENST00000488905 SIM1P81133 766 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-231ENST00000488905 ENPP2Q13822 863 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 DENND1CQ8IV53 801 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 RGL4Q8IZJ4 473 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 CPXM2Q8N436 756 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 KDF1Q8NAX2 398 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-231ENST00000488905 ANKRD52Q8NB46 1076 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 OR2I1PQ8NGU4 316 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 UCMAQ8WVF2 138 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 GATA6Q92908 595 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 FOXJ1Q92949 421 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 PIWIL1Q96J94 861 aaKnown RBP19.3■□□□□ 0.68
HDAC6-231ENST00000488905 PRDM16Q9HAZ2 1276 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 USP36Q9P275 1121 aaKnown RBP19.3■□□□□ 0.68
HDAC6-231ENST00000488905 THAP10Q9P2Z0 257 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-231ENST00000488905 SUSD2Q9UGT4 822 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 ZMIZ1Q9ULJ6 1067 aa19.3■□□□□ 0.68
HDAC6-231ENST00000488905 DSPP15924 2871 aaKnown RBP19.3■□□□□ 0.68
HDAC6-231ENST00000488905 ZFYVE26Q68DK2 2539 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 SLC12A8A0AV02 714 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 TMEM8BA6NDV4 472 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 CETN3O15182 167 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 CYBBP04839 570 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 SYPP08247 313 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 TKTL1P51854 596 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 ZNF132P52740 706 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 GOLGA7BQ2TAP0 167 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 DCAF17Q5H9S7 520 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-231ENST00000488905 SYCP2LQ5T4T6 812 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 METTL3Q86U44 580 aaKnown RBP19.29■□□□□ 0.68
HDAC6-231ENST00000488905 FAM217AQ8IXS0 508 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 PLD4Q96BZ4 506 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 MKRN2Q9H000 416 aaKnown RBP19.29■□□□□ 0.68
HDAC6-231ENST00000488905 DNAAF2Q9NVR5 837 aaKnown RBP19.29■□□□□ 0.68
HDAC6-231ENST00000488905 ATP6V1DQ9Y5K8 247 aa19.29■□□□□ 0.68
HDAC6-231ENST00000488905 TP53BP1Q12888 1972 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-231ENST00000488905 HYAL3O43820 417 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-231ENST00000488905 ZBED1O96006 694 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 BCAT1P54687 386 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 EIF4HQ15056 248 aaKnown RBP19.28■□□□□ 0.68
HDAC6-231ENST00000488905 PLEKHG6Q3KR16 790 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 CBWD6Q4V339 395 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 CBWD3Q5JTY5 395 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 WDR45BQ5MNZ6 344 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 CBWD5Q5RIA9 395 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 TCERG1LQ5VWI1 586 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 BHLHA9Q7RTU4 235 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 TATDN2Q93075 761 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 CCDC34Q96HJ3 373 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 ULBP1Q9BZM6 244 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 WSB2Q9NYS7 404 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-231ENST00000488905 TSPAN16Q9UKR8 245 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 CLEC4EQ9ULY5 219 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 NEUROG3Q9Y4Z2 214 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 KNL1Q8NG31 2342 aa19.28■□□□□ 0.68
HDAC6-231ENST00000488905 ANKRD11Q6UB99 2663 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-231ENST00000488905 MEI4A8MW99 385 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 TULP2O00295 520 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 XPO1O14980 1071 aaKnown RBP19.27■□□□□ 0.68
HDAC6-231ENST00000488905 SLC16A3O15427 465 aaKnown RBP19.27■□□□□ 0.68
HDAC6-231ENST00000488905 SYNCRIPO60506 623 aaKnown RBP19.27■□□□□ 0.68
HDAC6-231ENST00000488905 CD59P13987 128 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 GNSP15586 552 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 PNOCQ13519 176 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 ZNF234Q14588 700 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 E2F5Q15329 346 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 PM20D1Q6GTS8 502 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 RBBP8NLQ8NC74 664 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-231ENST00000488905 DDI1Q8WTU0 396 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 TOE1Q96GM8 510 aaKnown RBP19.27■□□□□ 0.68
HDAC6-231ENST00000488905 CIPCQ9C0C6 399 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 GDPD2Q9HCC8 539 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 OLA1Q9NTK5 396 aaKnown RBP19.27■□□□□ 0.68
HDAC6-231ENST00000488905 ELOVL2Q9NXB9 296 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 NFE2L3Q9Y4A8 694 aa19.27■□□□□ 0.68
HDAC6-231ENST00000488905 TMEM131Q92545 1883 aa19.26■□□□□ 0.67
HDAC6-231ENST00000488905 KCNJ18B7U540 433 aa19.26■□□□□ 0.67
HDAC6-231ENST00000488905 GJB3O75712 270 aa19.26■□□□□ 0.67
HDAC6-231ENST00000488905 NCAM1P13591 858 aa19.26■□□□□ 0.67
HDAC6-231ENST00000488905 PRKCHP24723 683 aa19.26■□□□□ 0.67
HDAC6-231ENST00000488905 MAOBP27338 520 aa19.26■□□□□ 0.67
HDAC6-231ENST00000488905 PRCPP42785 496 aa19.26■□□□□ 0.67
HDAC6-231ENST00000488905 FAM193AP78312 1265 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms