RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 LIASO43766 372 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 EFEMP2O95967 443 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 OR4Q2P0C623 313 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 USP17L7P0C7H9 530 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 CYP2F1P24903 491 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 RDXP35241 583 aaKnown RBP13.22□□□□□ -0.29
NELFE-209ENST00000488426 GRIK1P39086 918 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 KCNJ1P48048 391 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 CDR1P51861 262 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 KRT17Q04695 432 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 ADCY2Q08462 1091 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 SNX1Q13596 522 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 TFDP2Q14188 446 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 DPYSL3Q14195 570 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 HLTFQ14527 1009 aaKnown RBP eCLIP13.22□□□□□ -0.29
NELFE-209ENST00000488426 KRT81Q14533 505 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 GJD3Q8N144 294 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 VPS52Q8N1B4 723 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 MRPL43Q8N983 215 aaKnown RBP13.22□□□□□ -0.29
NELFE-209ENST00000488426 PGAP3Q96FM1 320 aaPredicted RBP13.22□□□□□ -0.29
NELFE-209ENST00000488426 C8orf48Q96LL4 319 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 ZNF670Q9BS34 389 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 TTPALQ9BTX7 342 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 ADAM33Q9BZ11 813 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 FAM129AQ9BZQ8 928 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 ABI2Q9NYB9 513 aaPredicted RBP13.22□□□□□ -0.29
NELFE-209ENST00000488426 RAPGEFL1Q9UHV5 662 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 TNFRSF10BO14763 440 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 CST8O60676 142 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 CXCL14O95715 111 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 FYNP06241 537 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 CD48P09326 243 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 TNNT3P45378 269 aaPredicted RBP13.21□□□□□ -0.29
NELFE-209ENST00000488426 PTK6Q13882 451 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 CASP8Q14790 479 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 PPP1R7Q15435 360 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 DPYSL2Q16555 572 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 OTUD1Q5VV17 481 aaPredicted RBP13.21□□□□□ -0.29
NELFE-209ENST00000488426 HFE2Q6ZVN8 426 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 C2orf15Q8WU43 125 aaKnown RBP13.21□□□□□ -0.29
NELFE-209ENST00000488426 NKD2Q969F2 451 aaPredicted RBP13.21□□□□□ -0.29
NELFE-209ENST00000488426 MAK16Q9BXY0 300 aaKnown RBP13.21□□□□□ -0.29
NELFE-209ENST00000488426 VIPAS39Q9H9C1 493 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 PCDH18Q9HCL0 1135 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 CD207Q9UJ71 328 aa13.21□□□□□ -0.29
NELFE-209ENST00000488426 DRG1Q9Y295 367 aaKnown RBP13.21□□□□□ -0.29
NELFE-209ENST00000488426 PLXNA3P51805 1871 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 MYO16Q9Y6X6 1858 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 APOC4-APOC2K7ER74 178 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 M0QYT0 321 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 APOC2P02655 101 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 ECHS1P30084 290 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 PPM1AP35813 382 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 SLC5A3P53794 718 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 AIF1P55008 147 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 VCPP55072 806 aaKnown RBP13.21□□□□□ -0.3
NELFE-209ENST00000488426 ZP2Q05996 745 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 DEUP1Q05D60 604 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 GPR17Q13304 367 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 BYSLQ13895 437 aaKnown RBP13.21□□□□□ -0.3
NELFE-209ENST00000488426 TRADDQ15628 312 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 SMAD2Q15796 467 aaKnown RBP13.21□□□□□ -0.3
NELFE-209ENST00000488426 SYPL2Q5VXT5 272 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 SYCE2Q6PIF2 218 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 RFX6Q8HWS3 928 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 RNF168Q8IYW5 571 aaPredicted RBP13.21□□□□□ -0.3
NELFE-209ENST00000488426 SMRP1Q8NCR6 262 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 SPPL2BQ8TCT7 592 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 TMEM169Q96HH4 297 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 CCDC114Q96M63 670 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 RNF157Q96PX1 679 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 ZBP1Q9H171 429 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 DPH5Q9H2P9 285 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 AP4E1Q9UPM8 1137 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 NAALADL1Q9UQQ1 740 aa13.21□□□□□ -0.3
NELFE-209ENST00000488426 CLASP2O75122 1294 aaKnown RBP13.2□□□□□ -0.3
NELFE-209ENST00000488426 SASH3O75995 380 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 F9P00740 461 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 ITGAVP06756 1048 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 NCAM1P13591 858 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 CPB1P15086 417 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 USP41Q3LFD5 358 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
NELFE-209ENST00000488426 RTP2Q5QGT7 225 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 SND1Q7KZF4 910 aaKnown RBP eCLIP13.2□□□□□ -0.3
NELFE-209ENST00000488426 DDX42Q86XP3 938 aaKnown RBP eCLIP13.2□□□□□ -0.3
NELFE-209ENST00000488426 SCN4BQ8IWT1 228 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 SLC35B2Q8TB61 432 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 CCHCR1Q8TD31 782 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 FAF2Q96CS3 445 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 S1PR5Q9H228 398 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 ACBD3Q9H3P7 528 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 PRDM16Q9HAZ2 1276 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 C11orf16Q9NQ32 467 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 CALCOCO1Q9P1Z2 691 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 RCOR3Q9P2K3 495 aaPredicted RBP13.2□□□□□ -0.3
NELFE-209ENST00000488426 DNPEPQ9ULA0 475 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 FZD10Q9ULW2 581 aa13.2□□□□□ -0.3
NELFE-209ENST00000488426 HCFC2Q9Y5Z7 792 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms