RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 DDI1Q8WTU0 396 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 RNF139Q8WU17 664 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 SPACA7Q96KW9 195 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 ZSWIM1Q9BR11 485 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 EDEM2Q9BV94 578 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 DCLK3Q9C098 648 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 FAM124BQ9H5Z6 455 aaPredicted RBP11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 CALCOCO1Q9P1Z2 691 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 ZNF510Q9Y2H8 683 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 STARD13Q9Y3M8 1113 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 ATXN2Q99700 1313 aaKnown RBP11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 TMEM131Q92545 1883 aa11.83□□□□□ -0.52
NIPAL3-207ENST00000488155 ACACBO00763 2458 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 C4orf47A7E2U8 309 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 MSI1O43347 362 aaKnown RBP11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 GABBR2O75899 941 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 PTGER3P43115 390 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 MFAP3P55082 362 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 CETN1Q12798 172 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 PKDCCQ504Y2 493 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 FYB2Q5VWT5 728 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 PMF1Q6P1K2 205 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 LCLAT1Q6UWP7 414 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 LPCAT2Q7L5N7 544 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 C11orf74Q86VG3 221 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 TRIM59Q8IWR1 403 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 RBBP8NLQ8NC74 664 aaPredicted RBP11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 EHBP1Q8NDI1 1231 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 KCNV2Q8TDN2 545 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 CRACR2AQ9BSW2 395 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 CD93Q9NPY3 652 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 CYP8B1Q9UNU6 501 aa11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.82□□□□□ -0.52
NIPAL3-207ENST00000488155 NYNRINQ9P2P1 1898 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 LNP1A1A4G5 178 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 KHNYNO15037 678 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 ZBTB24O43167 697 aaPredicted RBP11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 PENKP01210 267 aaPredicted RBP11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 AFPP02771 609 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 CYBBP04839 570 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 PAEPP09466 180 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 SETSIPP0DME0 302 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 KRT5P13647 590 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 NDUFV2P19404 249 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 DAOAP59103 153 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 IRX4P78413 519 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 RPL6Q02878 288 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 CNGA2Q16280 664 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 UAP1L1Q3KQV9 507 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 KIAA1324Q6UXG2 1013 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 SLC35F5Q8WV83 523 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 SORCS1Q8WY21 1168 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 PLD4Q96BZ4 506 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 KREMEN1Q96MU8 473 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 MIS12Q9H081 205 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 INTS2Q9H0H0 1204 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 OLA1Q9NTK5 396 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 TMEM74BQ9NUR3 256 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 FBXO10Q9UK96 956 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 KIAA1257Q9ULG3 409 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 STON1Q9Y6Q2 735 aa11.81□□□□□ -0.52
NIPAL3-207ENST00000488155 PMM2O15305 246 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 P4HA2O15460 535 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 GNA14O95837 355 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 ADRB1P08588 477 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 ITPKAP23677 461 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 IL12RB1P42701 662 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 HARS2P49590 506 aaKnown RBP11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 LIMK1P53667 647 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 BYSLQ13895 437 aaKnown RBP11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 TRIP4Q15650 581 aaPredicted RBP11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 TRIM61Q5EBN2 209 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 GJB7Q6PEY0 223 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 CACUL1Q86Y37 369 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 KCTD13Q8WZ19 329 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 GABRG3Q99928 467 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 CIPCQ9C0C6 399 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 UBE2TQ9NPD8 197 aaPredicted RBP11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 ACP6Q9NPH0 428 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 FSCN3Q9NQT6 498 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 CNGB3Q9NQW8 809 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 ST7Q9NRC1 585 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 ABCC13Q9NSE7 274 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 GOLGA4Q13439 2230 aaKnown RBP11.8□□□□□ -0.52
NIPAL3-207ENST00000488155 PCDH15Q96QU1 1955 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 TDRD6O60522 2096 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 IGHV1OR15-9A0A0B4J2B8 117 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 GOLGA6L7A0A1B0GV03 622 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 TM4SF5O14894 197 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 LTFP02788 710 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 USP8P40818 1118 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 SGSHP51688 502 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 UBE2HP62256 183 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 APBA1Q02410 837 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 ARHGAP44Q17R89 818 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 N4BP2L1Q5TBK1 243 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 LYSMD4Q5XG99 296 aa11.79□□□□□ -0.52
NIPAL3-207ENST00000488155 TMEM215Q68D42 235 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms