RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 LDLRAD3Q86YD5 345 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 THNSL1Q8IYQ7 743 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 CMTM4Q8IZR5 234 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 STAG1Q8WVM7 1258 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 CASP10Q92851 521 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 APBB2Q92870 758 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 RAX2Q96IS3 184 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 MYADMQ96S97 322 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 AGAP2Q99490 1192 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 CWH43Q9H720 699 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 ENTPD7Q9NQZ7 604 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 TOPORSQ9NS56 1045 aaPredicted RBP5.03□□□□□ -1.6
CNN3-206ENST00000487539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.03□□□□□ -1.6
CNN3-206ENST00000487539 AURKAIP1Q9NWT8 199 aaPredicted RBP5.03□□□□□ -1.6
CNN3-206ENST00000487539 MCM8Q9UJA3 840 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 DBNLQ9UJU6 430 aaKnown RBP5.03□□□□□ -1.6
CNN3-206ENST00000487539 TMPRSS11EQ9UL52 423 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 CCPG1Q9ULG6 757 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 FPGT-TNNI3KV9GXZ4 949 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 PIEZO2Q9H5I5 2752 aa5.03□□□□□ -1.6
CNN3-206ENST00000487539 ZNF532Q9HCE3 1301 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 SHROOM3Q8TF72 1996 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 UBE2QL1A1L167 161 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 TMEM8BA6NDV4 472 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 SHISA7A6NL88 538 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 TBKBP1A7MCY6 615 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 CAPN14A8MX76 684 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 GPR39O43194 453 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 PRDM1O75626 825 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 ALDH1A2O94788 518 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 CLEC2LP0C7M8 214 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 SRGAP2BP0DMP2 458 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 ENPP1P22413 925 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 SLC16A2P36021 539 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 WNT3AP56704 352 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 STARD6P59095 220 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 RPS6P62753 249 aaKnown RBP5.02□□□□□ -1.61
CNN3-206ENST00000487539 GPC5P78333 572 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 TMPRSS15P98073 1019 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 MEF2AQ02078 507 aaPredicted RBP5.02□□□□□ -1.61
CNN3-206ENST00000487539 SP2Q02086 613 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 UBE3AQ05086 875 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 CD69Q07108 199 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 SRSF1Q07955 248 aaKnown RBP eCLIP5.02□□□□□ -1.61
CNN3-206ENST00000487539 MGAT5Q09328 741 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 TROAPQ12815 778 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 UBXN2BQ14CS0 331 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 WTAPQ15007 396 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 PDCD1Q15116 288 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 PTPN14Q15678 1187 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 HSDL1Q3SXM5 330 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 PITRM1Q5JRX3 1037 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 CCDC158Q5M9N0 1113 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 FBXO47Q5MNV8 452 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 LAIR1Q6GTX8 287 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 SPATS2Q86XZ4 545 aaKnown RBP5.02□□□□□ -1.61
CNN3-206ENST00000487539 MRPL43Q8N983 215 aaKnown RBP5.02□□□□□ -1.61
CNN3-206ENST00000487539 ATL2Q8NHH9 583 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 SLC22A17Q8WUG5 538 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 SSH1Q8WYL5 1049 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 MRPS27Q92552 414 aaKnown RBP5.02□□□□□ -1.61
CNN3-206ENST00000487539 EXTL1Q92935 676 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 ARL8AQ96BM9 186 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 CEP95Q96GE4 821 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 LRIG1Q96JA1 1093 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 TAAR1Q96RJ0 339 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 FDXACB1Q9BRP7 624 aaPredicted RBP5.02□□□□□ -1.61
CNN3-206ENST00000487539 KCTD10Q9H3F6 313 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 COL20A1Q9P218 1284 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 ADD3Q9UEY8 706 aaKnown RBP5.02□□□□□ -1.61
CNN3-206ENST00000487539 KLK13Q9UKR3 277 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 CDY2AQ9Y6F7 541 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 CACNA1EQ15878 2313 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 FREM2Q5SZK8 3169 aa5.02□□□□□ -1.61
CNN3-206ENST00000487539 LOXHD1Q8IVV2 1947 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 FRMPD2Q68DX3 1309 aaPredicted RBP5.01□□□□□ -1.61
CNN3-206ENST00000487539 APC2O95996 2303 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 KANSL1LA0AUZ9 987 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 MGEA5O60502 916 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 MBD4O95243 580 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 MTHFD2P13995 350 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 NOVA1P51513 510 aaKnown RBP5.01□□□□□ -1.61
CNN3-206ENST00000487539 STAT2P52630 851 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 LIMK1P53667 647 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 LGALS4P56470 323 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 IKQ13123 557 aaPredicted RBP5.01□□□□□ -1.61
CNN3-206ENST00000487539 MTAPQ13126 283 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 CCDC142Q17RM4 750 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.01□□□□□ -1.61
CNN3-206ENST00000487539 AASDHQ4L235 1098 aaPredicted RBP5.01□□□□□ -1.61
CNN3-206ENST00000487539 CT83Q5H943 113 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 FKBP15Q5T1M5 1219 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 SLC9C2Q5TAH2 1124 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 TCEAL6Q6IPX3 200 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 TAS1R1Q7RTX1 841 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 GPR149Q86SP6 731 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 SLC41A1Q8IVJ1 513 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 ZNF808Q8N4W9 903 aaPredicted RBP5.01□□□□□ -1.61
CNN3-206ENST00000487539 PIK3C3Q8NEB9 887 aa5.01□□□□□ -1.61
CNN3-206ENST00000487539 PPTC7Q8NI37 304 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms