RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 PRRX2Q99811 253 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 LSM14BQ9BX40 385 aaKnown RBP7.51□□□□□ -1.21
UBE4B-209ENST00000487244 UBXN6Q9BZV1 441 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 VPS16Q9H269 839 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 CHRDQ9H2X0 955 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 LRRC4Q9HBW1 653 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 PRMT8Q9NR22 394 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-209ENST00000487244 ANO10Q9NW15 660 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 TJP2Q9UDY2 1190 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 RASAL2Q9UJF2 1139 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 DNAJC12Q9UKB3 198 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 KIAA1257Q9ULG3 409 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 PTPRZ1P23471 2315 aaPredicted RBP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 FOXN3O00409 490 aaPredicted RBP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 TRDMT1O14717 391 aaKnown RBP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 MSI1O43347 362 aaKnown RBP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 THAP12O43422 761 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 STC2O76061 302 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 NFATC1O95644 943 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 SP9P0CG40 484 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 TDGF1P13385 188 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 ATP1A3P13637 1013 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 ZNF18P17022 549 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 GNA15P30679 374 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 GPD2P43304 727 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 SLC6A11P48066 632 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 SLC8A3P57103 927 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 DAOAP59103 153 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 SATB1Q01826 763 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 CSTF1Q05048 431 aaKnown RBP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 KDSRQ06136 332 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 DMWDQ09019 674 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 RAPGEF1Q13905 1077 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 C6orf118Q5T5N4 469 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 KLHDC7AQ5VTJ3 777 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 BSPRYQ5W0U4 402 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 KLHDC10Q6PID8 442 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 RSRC2Q7L4I2 434 aaKnown RBP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 ENOSF1Q7L5Y1 443 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 APTXQ7Z2E3 356 aaKnown RBP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 SLC47A2Q86VL8 602 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 DDX42Q86XP3 938 aaKnown RBP eCLIP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 TMEM25Q86YD3 366 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 PASD1Q8IV76 773 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 SIX6OS1Q8N1H7 587 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 ZNF606Q8WXB4 792 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 KCTD13Q8WZ19 329 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 BHMTQ93088 406 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 ZNF775Q96BV0 537 aaPredicted RBP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 PIWIL1Q96J94 861 aaKnown RBP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 P2RY13Q9BPV8 354 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 FUCA2Q9BTY2 467 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 NAA15Q9BXJ9 866 aaKnown RBP7.5□□□□□ -1.21
UBE4B-209ENST00000487244 MIS12Q9H081 205 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 GANQ9H2C0 597 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 PLCB1Q9NQ66 1216 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 CLIC5Q9NZA1 410 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 MARCH2Q9P0N8 246 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 SFMBT1Q9UHJ3 866 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 DNMT3LQ9UJW3 386 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 SH3BP1Q9Y3L3 701 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 R4GN57 208 aa7.5□□□□□ -1.21
UBE4B-209ENST00000487244 DMXL1Q9Y485 3027 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 SLC12A8A0AV02 714 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 SYCE3A1L190 88 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 ESPNB1AK53 854 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 E5RJQ4 531 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 F8VZ95 297 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 SLC9A3R1O14745 358 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-209ENST00000487244 TRIM24O15164 1050 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 NCAM2O15394 837 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 LAMTOR5O43504 91 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 FYNP06241 537 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 RALAP11233 206 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 ADH5P11766 374 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 BMP2P12643 396 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 UCHL3P15374 230 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 CORO1AP31146 461 aaKnown RBP7.49□□□□□ -1.21
UBE4B-209ENST00000487244 MAGEA9P43362 315 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 RPL34P49207 117 aaKnown RBP7.49□□□□□ -1.21
UBE4B-209ENST00000487244 COPB1P53618 953 aaKnown RBP7.49□□□□□ -1.21
UBE4B-209ENST00000487244 SEC13P55735 322 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 GRSF1Q12849 480 aaKnown RBP eCLIP7.49□□□□□ -1.21
UBE4B-209ENST00000487244 PDCLQ13371 301 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 LRRC32Q14392 662 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 DRAP1Q14919 205 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-209ENST00000487244 STILQ15468 1287 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 DGKKQ5KSL6 1271 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 BTBD8Q5XKL5 378 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 C1orf228Q6PIY5 440 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 HTR3DQ70Z44 454 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 DHX40Q8IX18 779 aaKnown RBP7.49□□□□□ -1.21
UBE4B-209ENST00000487244 FAM71AQ8IYT1 594 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 ARHGAP18Q8N392 663 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 PHTF2Q8N3S3 785 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 ZNF276Q8N554 614 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 WDTC1Q8N5D0 677 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 MEIOBQ8N635 442 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 NAT16Q8N8M0 369 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 C1orf131Q8NDD1 294 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms