RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 APOEP02649 317 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 ERBB2P04626 1255 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 TYRP14679 529 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 OPRD1P41143 372 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 TBX4P57082 545 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 JAM2P57087 298 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 CCINQ13939 588 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 PUM1Q14671 1186 aaKnown RBP eCLIP10.65□□□□□ -0.7
NEK4-204ENST00000487068 FBXO43Q4G163 708 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 PREPLQ4J6C6 727 aaPredicted RBP10.65□□□□□ -0.7
NEK4-204ENST00000487068 PTPN20Q4JDL3 420 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 DCAF6Q58WW2 860 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 EFHC1Q5JVL4 640 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 FAM102AQ5T9C2 384 aaPredicted RBP10.65□□□□□ -0.7
NEK4-204ENST00000487068 NUGGCQ68CJ6 796 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 DPY19L2P1Q6NXN4 242 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 MSANTD2Q6P1R3 559 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 RHBDF2Q6PJF5 856 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 ZC3H14Q6PJT7 736 aaKnown RBP10.65□□□□□ -0.7
NEK4-204ENST00000487068 TSSK4Q6SA08 328 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 NUDT18Q6ZVK8 323 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 C12orf40Q86WS4 652 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 ERICH1Q86X53 443 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 TMEM25Q86YD3 366 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 KIAA2013Q8IYS2 634 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 SPEM1Q8N4L4 309 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 ZNF276Q8N554 614 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 RPLP0P6Q8NHW5 317 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 DQX1Q8TE96 717 aaKnown RBP10.65□□□□□ -0.7
NEK4-204ENST00000487068 DDI1Q8WTU0 396 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 SLC20A1Q8WUM9 679 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 RNF34Q969K3 372 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 PIWIL1Q96J94 861 aaKnown RBP10.65□□□□□ -0.7
NEK4-204ENST00000487068 PNKPQ96T60 521 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 LHX5Q9H2C1 402 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 NAALADL1Q9UQQ1 740 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 R4GN57 208 aa10.65□□□□□ -0.7
NEK4-204ENST00000487068 NUP205Q92621 2012 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 TYW5A2RUC4 315 aaKnown RBP10.64□□□□□ -0.71
NEK4-204ENST00000487068 HSF2BPO75031 334 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 ATG13O75143 517 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 TULP3O75386 442 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 KAT7O95251 611 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 TPM3P06753 285 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 CCDC172P0C7W6 258 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 CXCL12P48061 93 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 SLC6A11P48066 632 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 SLC11A2P49281 568 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 UBASH3AP57075 661 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 RNASE9P60153 205 aaKnown RBP10.64□□□□□ -0.71
NEK4-204ENST00000487068 YWHAZP63104 245 aaKnown RBP10.64□□□□□ -0.71
NEK4-204ENST00000487068 FANCCQ00597 558 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 SATB1Q01826 763 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 CDR2Q01850 454 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 TRIP4Q15650 581 aaPredicted RBP10.64□□□□□ -0.71
NEK4-204ENST00000487068 C2orf27AQ580R0 203 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 C10orf76Q5T2E6 689 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 HEATR6Q6AI08 1181 aaKnown RBP10.64□□□□□ -0.71
NEK4-204ENST00000487068 GRAMD4Q6IC98 578 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 Q6ZNB5 142 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 APTXQ7Z2E3 356 aaKnown RBP10.64□□□□□ -0.71
NEK4-204ENST00000487068 TMEM110Q86TL2 294 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 TAC4Q86UU9 113 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 ZNF677Q86XU0 584 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 UNC45BQ8IWX7 931 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 SYNPOQ8N3V7 929 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 CCDC26Q8TAB7 109 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 CPA5Q8WXQ8 436 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 ACDQ96AP0 544 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 FBRSL1Q9HCM7 1045 aaKnown RBP10.64□□□□□ -0.71
NEK4-204ENST00000487068 WDR35Q9P2L0 1181 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 DEC1Q9P2X7 70 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 AGO1Q9UL18 857 aaKnown RBP10.64□□□□□ -0.71
NEK4-204ENST00000487068 SLC8A2Q9UPR5 921 aa10.64□□□□□ -0.71
NEK4-204ENST00000487068 CKAP5Q14008 2032 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 CACNA1AO00555 2505 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 PLXND1Q9Y4D7 1925 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 A0A1B0GTH6 734 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 TBC1D3BA6NDS4 549 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 LRRC10BA6NIK2 292 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 TSPAN3O60637 253 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 DAB1O75553 588 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 KLKB1P03952 638 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 SP9P0CG40 484 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 FERP16591 822 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 TIE1P35590 1138 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 EIF2DP41214 584 aaKnown RBP10.63□□□□□ -0.71
NEK4-204ENST00000487068 NSFP46459 744 aaKnown RBP10.63□□□□□ -0.71
NEK4-204ENST00000487068 RPL34P49207 117 aaKnown RBP10.63□□□□□ -0.71
NEK4-204ENST00000487068 DGKGP49619 791 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 NOMO3P69849 1222 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 CDK17Q00537 523 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 NME3Q13232 169 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 FZD5Q13467 585 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 TAF5Q15542 800 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 ASIC2Q16515 512 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 C2CD6Q53TS8 623 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 SYPL2Q5VXT5 272 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 LRSAM1Q6UWE0 723 aa10.63□□□□□ -0.71
NEK4-204ENST00000487068 OLFML1Q6UWY5 402 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms