RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 GPR34Q9UPC5 381 aa4.51□□□□□ -1.69
R3HDM1-217ENST00000486532 CARD8Q9Y2G2 431 aa4.51□□□□□ -1.69
R3HDM1-217ENST00000486532 GPR52Q9Y2T5 361 aa4.51□□□□□ -1.69
R3HDM1-217ENST00000486532 ACTL7AQ9Y615 435 aa4.51□□□□□ -1.69
R3HDM1-217ENST00000486532 SCRIBQ14160 1630 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ARPC4-TTLL3A0A0A6YYG9 625 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 A0A0B4J269 797 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 PRAMEF33A0A0G2JMD5 474 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 C17orf113A0A1B0GUU1 675 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 RRN3P2A6NIE6 340 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 B4E171 279 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 PROB1E7EW31 1015 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 SGK1O00141 431 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 CETN3O15182 167 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 STX6O43752 255 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 CEP104O60308 925 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 PRAMEF10O60809 474 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 NOL3O60936 208 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 C1QL1O75973 258 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 HAUS5O94927 633 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 HSPA4LO95757 839 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 AKR1B1P15121 316 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ZNF24P17028 368 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 DDCP20711 480 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 SFPQP23246 707 aaKnown RBP eCLIP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 SLC6A2P23975 617 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 CENPAP49450 140 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 MCM2P49736 904 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ETV1P50549 477 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ALDH5A1P51649 535 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 TUBA1BP68363 451 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 RELQ04864 619 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 SRSF4Q08170 494 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ZNF844Q08AG5 666 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 MTM1Q13496 603 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 TAF12Q16514 161 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 WSCD2Q2TBF2 565 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 FAM153CQ494X1 144 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 KRBOX4Q5JUW0 171 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 KIAA0895LQ68EN5 471 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 SLC30A6Q6NXT4 461 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 VWA1Q6PCB0 445 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 PPP1R21Q6ZMI0 780 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 TUBA1AQ71U36 451 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 SRGAP1Q7Z6B7 1085 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ZER1Q7Z7L7 766 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 SPATA24Q86W54 205 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ZNF619Q8N2I2 560 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 AOPEPQ8N6M6 819 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 PCYOX1LQ8NBM8 494 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ANKRD20A12PQ8NF67 263 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ERMNQ8TAM6 284 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 TBC1D15Q8TC07 691 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 MIPOL1Q8TD10 442 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ADAMTS18Q8TE60 1221 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 NOC3LQ8WTT2 800 aaKnown RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 ZNF845Q96IR2 970 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 VPS39Q96JC1 886 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 PGBD1Q96JS3 809 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 CCDC138Q96M89 665 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 NT5C1BQ96P26 610 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 TUBA1CQ9BQE3 449 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 SDF4Q9BRK5 362 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 CHCHD6Q9BRQ6 235 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 CRB3Q9BUF7 120 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 CCDC8Q9H0W5 538 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 C11orf54Q9H0W9 315 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 C2orf40Q9H1Z8 148 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 LDAHQ9H6V9 325 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 TUBA8Q9NY65 449 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 IL1RAPL1Q9NZN1 696 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 STK39Q9UEW8 545 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 CHORDC1Q9UHD1 332 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 SLC23A1Q9UHI7 598 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 SLC13A4Q9UKG4 626 aa4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 C19orf53Q9UNZ5 99 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-217ENST00000486532 CECR2Q9BXF3 1484 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 GAKO14976 1311 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 SPAG9O60271 1321 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 EVC2Q86UK5 1308 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 A0A0G2JPF8 293 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 CLRN2A0PK11 232 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 LRRC3CA6NJW4 275 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 LACTBL1A8MY62 500 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 HNRNPCL3B7ZW38 293 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 PI4K2BG5E9Z4 385 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 H0Y626 953 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 GCOM1H8Y6P7 765 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 UBXN8O00124 270 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 AP3B1O00203 1094 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 TULP2O00295 520 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 EBAG9O00559 213 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 GABRDO14764 452 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 MGST3O14880 152 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 KIAA0391O15091 583 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 PROM1O43490 865 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 ZNF254O75437 659 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 SLITRK3O94933 977 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 PAHP00439 452 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms