RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 CFHR1Q03591 330 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 PFKFB3Q16875 520 aaPredicted RBP6.11□□□□□ -1.43
LTN1-206ENST00000486427 DGKKQ5KSL6 1271 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 PAPD7Q5XG87 772 aaKnown RBP6.11□□□□□ -1.43
LTN1-206ENST00000486427 RASGRP3Q8IV61 690 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 FAM186BQ8IYM0 893 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 C16orf71Q8IYS4 520 aaPredicted RBP6.11□□□□□ -1.43
LTN1-206ENST00000486427 DENND1AQ8TEH3 1009 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 OVCA2Q8WZ82 227 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 ELAC2Q9BQ52 826 aaKnown RBP6.11□□□□□ -1.43
LTN1-206ENST00000486427 TM2D2Q9BX73 214 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 VPS16Q9H269 839 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 AGO4Q9HCK5 861 aaKnown RBP6.11□□□□□ -1.43
LTN1-206ENST00000486427 TM7SF3Q9NS93 570 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 SETD1BQ9UPS6 1966 aaKnown RBP6.11□□□□□ -1.43
LTN1-206ENST00000486427 PRYO14603 147 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 HNRNPDLO14979 420 aaKnown RBP6.1□□□□□ -1.43
LTN1-206ENST00000486427 CTIFO43310 598 aaKnown RBP6.1□□□□□ -1.43
LTN1-206ENST00000486427 TAF5LO75529 589 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 DUSP1P28562 367 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 SERPINB3P29508 390 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 GSTM5P46439 218 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 GHRHRQ02643 423 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 ELF2Q15723 593 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 CNGA3Q16281 694 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 P3H1Q32P28 736 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 SYCP2LQ5T4T6 812 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 MSANTD2Q6P1R3 559 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 SKAP1Q86WV1 359 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 CCDC146Q8IYE0 955 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 SCARB1Q8WTV0 552 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 EPS8L2Q9H6S3 715 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 CDC23Q9UJX2 597 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 MAFFQ9ULX9 164 aa6.1□□□□□ -1.43
LTN1-206ENST00000486427 HEMK1Q9Y5R4 338 aaPredicted RBP6.1□□□□□ -1.43
LTN1-206ENST00000486427 MOSPD3O75425 235 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 MMP8P22894 467 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 TACR3P29371 465 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 IDUAP35475 653 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 MMP13P45452 471 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 TRIP6Q15654 476 aaKnown RBP6.09□□□□□ -1.43
LTN1-206ENST00000486427 ACSM6Q6P461 480 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 C16orf89Q6UX73 402 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 KYAT3Q6YP21 454 aaKnown RBP6.09□□□□□ -1.43
LTN1-206ENST00000486427 OR52L2PQ8NGH6 319 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 PRSS3P2Q8NHM4 247 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 AKAP1Q92667 903 aaKnown RBP eCLIP6.09□□□□□ -1.43
LTN1-206ENST00000486427 SIGLEC11Q96RL6 698 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 GATA5Q9BWX5 397 aaPredicted RBP6.09□□□□□ -1.43
LTN1-206ENST00000486427 CDCP1Q9H5V8 836 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 NLRC4Q9NPP4 1024 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 ARL8BQ9NVJ2 186 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 CA14Q9ULX7 337 aa6.09□□□□□ -1.43
LTN1-206ENST00000486427 PIP5K1BO14986 540 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 NPC1O15118 1278 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 ITGA5P08648 1049 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 IFIT2P09913 472 aaKnown RBP6.08□□□□□ -1.44
LTN1-206ENST00000486427 NDUFS1P28331 727 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 VPS41P49754 854 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 ZNF91Q05481 1191 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 HNRNPA0Q13151 305 aaKnown RBP6.08□□□□□ -1.44
LTN1-206ENST00000486427 RABEP1Q15276 862 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 ARL6IP4Q66PJ3 421 aaKnown RBP6.08□□□□□ -1.44
LTN1-206ENST00000486427 SYTL1Q8IYJ3 562 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 MUL1Q969V5 352 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 COQ8BQ96D53 544 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 MCRS1Q96EZ8 462 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 FCRL5Q96RD9 977 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 EIF3CQ99613 913 aaKnown RBP6.08□□□□□ -1.44
LTN1-206ENST00000486427 RNF26Q9BY78 433 aaPredicted RBP6.08□□□□□ -1.44
LTN1-206ENST00000486427 TMEM184CQ9NVA4 438 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 ASNSD1Q9NWL6 643 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 TRNAU1APQ9NX07 287 aaKnown RBP6.08□□□□□ -1.44
LTN1-206ENST00000486427 TUBA8Q9NY65 449 aaPredicted RBP6.08□□□□□ -1.44
LTN1-206ENST00000486427 MTMR4Q9NYA4 1195 aa6.08□□□□□ -1.44
LTN1-206ENST00000486427 PNMA6EA0A0J9YXQ4 647 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 GXYLT2A0PJZ3 443 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 PPEF2O14830 753 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 INPPL1O15357 1258 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 NTSR2O95665 410 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 PLAUP00749 431 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 MATN1P21941 496 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 HOXD12P35452 270 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 PPM1AP35813 382 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 AGTR2P50052 363 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 GRM4Q14833 912 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 FAM110CQ1W6H9 321 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 WIPF2Q8TF74 440 aaPredicted RBP6.07□□□□□ -1.44
LTN1-206ENST00000486427 SLC22A17Q8WUG5 538 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 NPIPB3Q92617 1050 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 ZNF48Q96MX3 618 aaPredicted RBP6.07□□□□□ -1.44
LTN1-206ENST00000486427 ELOVL1Q9BW60 279 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 TTLL2Q9BWV7 592 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 PCGF6Q9BYE7 350 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 HELLSQ9NRZ9 838 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 ELOVL5Q9NYP7 299 aa6.07□□□□□ -1.44
LTN1-206ENST00000486427 SIRT4Q9Y6E7 314 aaPredicted RBP6.07□□□□□ -1.44
LTN1-206ENST00000486427 ZNF521Q96K83 1311 aa6.06□□□□□ -1.44
LTN1-206ENST00000486427 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.06□□□□□ -1.44
LTN1-206ENST00000486427 AQP12BA6NM10 295 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms