RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 C2CD3Q4AC94 2353 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 NEDD8-MDP1E9PL57 170 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 GABRDO14764 452 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 EFSO43281 561 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 COCHO43405 550 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 ATP2C2O75185 946 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 WNT1P04628 370 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 TYRP14679 529 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 XBP1P17861 261 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 ACO1P21399 889 aaKnown RBP8.76□□□□□ -1.01
XRN1-212ENST00000486211 ACP1P24666 158 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 EPHA8P29322 1005 aaPredicted RBP8.76□□□□□ -1.01
XRN1-212ENST00000486211 CCT6AP40227 531 aaKnown RBP8.76□□□□□ -1.01
XRN1-212ENST00000486211 MYL7Q01449 175 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 TAF10Q12962 218 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 ARL13BQ3SXY8 428 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 CDCP2Q5VXM1 449 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 HAUS3Q68CZ6 603 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 SCARA3Q6AZY7 606 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 SLC39A4Q6P5W5 647 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 VSTM1Q6UX27 236 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 XKR5Q6UX68 686 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 ADGRF2Q8IZF7 708 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 ASB7Q9H672 318 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 DDX19AQ9NUU7 478 aaKnown RBP8.76□□□□□ -1.01
XRN1-212ENST00000486211 MARK1Q9P0L2 795 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 THAP10Q9P2Z0 257 aaPredicted RBP8.76□□□□□ -1.01
XRN1-212ENST00000486211 SEPT3Q9UH03 358 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 PLXNA2O75051 1894 aa8.76□□□□□ -1.01
XRN1-212ENST00000486211 A0A1W2PNU3 283 aaPredicted RBP8.75□□□□□ -1.01
XRN1-212ENST00000486211 BLACEA4D250 179 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 E9PMD0 336 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 ABL1P00519 1130 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 PIGRP01833 764 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 PLS3P13797 630 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 POU3F2P20265 443 aaPredicted RBP8.75□□□□□ -1.01
XRN1-212ENST00000486211 ABCB4P21439 1286 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 BDNFP23560 247 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 PRKCHP24723 683 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 GUCY2CP25092 1073 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 MCM7P33993 719 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 DGKGP49619 791 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 GRIN1Q05586 938 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 ST3GAL1Q11201 340 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 STK3Q13188 491 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 NR6A1Q15406 480 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 CPLX2Q6PUV4 134 aaKnown RBP8.75□□□□□ -1.01
XRN1-212ENST00000486211 IGF2-ASQ6U949 168 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 CCDC81Q6ZN84 652 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 ADAT2Q7Z6V5 191 aaKnown RBP8.75□□□□□ -1.01
XRN1-212ENST00000486211 CCDC116Q8IYX3 515 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 TMEM86AQ8N2M4 240 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 RBBP8NLQ8NC74 664 aaPredicted RBP8.75□□□□□ -1.01
XRN1-212ENST00000486211 MYLPFQ96A32 169 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 BICD1Q96G01 975 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 ZNF560Q96MR9 790 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 XPO6Q96QU8 1125 aaKnown RBP8.75□□□□□ -1.01
XRN1-212ENST00000486211 MMS19Q96T76 1030 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 SEMA3CQ99985 751 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 ARHGAP9Q9BRR9 750 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 MSTO1Q9BUK6 570 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 BBS2Q9BXC9 721 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 ACE2Q9BYF1 805 aaPredicted RBP8.75□□□□□ -1.01
XRN1-212ENST00000486211 POLR1BQ9H9Y6 1135 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 CRTAC1Q9NQ79 661 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 THSD1Q9NS62 852 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 TMEM30AQ9NV96 361 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 FBXO10Q9UK96 956 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 SH3BP1Q9Y3L3 701 aa8.75□□□□□ -1.01
XRN1-212ENST00000486211 F8VP50 259 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 HNRNPDLO14979 420 aaKnown RBP8.74□□□□□ -1.01
XRN1-212ENST00000486211 NPC1O15118 1278 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 YKT6O15498 198 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 USP12O75317 370 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 FSBPO95073 299 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 SEMA4FO95754 770 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 IGHV4-34P06331 123 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 OR52Z1P0C646 297 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 ACADMP11310 421 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 PCSK1P29120 753 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 PNPLA4P41247 253 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 LIG4P49917 911 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 CACNA2D1P54289 1103 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 NCKAP1LP55160 1127 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 C21orf59P57076 290 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 RACK1P63244 317 aaKnown RBP8.74□□□□□ -1.01
XRN1-212ENST00000486211 E2F1Q01094 437 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 BNIP3Q12983 259 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 CLN3Q13286 438 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 C4orf50Q6ZRC1 276 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 TPGS1Q6ZTW0 290 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 KCNK18Q7Z418 384 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 FAM26EQ8N5C1 309 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 CXorf38Q8TB03 319 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 SLC6A18Q96N87 628 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 TIPINQ9BVW5 301 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 GDAP2Q9NXN4 497 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 EHD2Q9NZN4 543 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 WDR35Q9P2L0 1181 aa8.74□□□□□ -1.01
XRN1-212ENST00000486211 MAGEC2Q9UBF1 373 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms