RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 C4orf46Q504U0 113 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 MZT2AQ6P582 158 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 SDR16C5Q8N3Y7 309 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 LINC01465Q8N7H1 131 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 PHKBQ93100 1093 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 BRIP1Q9BX63 1249 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 UNKQ9C0B0 810 aaKnown RBP5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 ZCWPW1Q9H0M4 648 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 PDGFCQ9NRA1 345 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 RRP7BPQ9NSQ0 103 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 SLIT2O94813 1529 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 METP08581 1390 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 NUP188Q5SRE5 1749 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 PXDNQ92626 1479 aa5.51□□□□□ -1.53
SMARCC1-207ENST00000485833 ABCC5O15440 1437 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 SMIM35A0A1B0GVV1 85 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 TMEM232C9JQI7 657 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 FOXN3O00409 490 aaPredicted RBP5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 PPM1GO15355 546 aaPredicted RBP5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 MT-CO3P00414 261 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 ANXA2P07355 339 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 APEHP13798 732 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 CD19P15391 556 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 HTRA4P83105 476 aaPredicted RBP5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 KLF9Q13886 244 aaPredicted RBP5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 KCNAB1Q14722 419 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 TMEM63BQ5T3F8 832 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 ZNF425Q6IV72 752 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 MIS18BP1Q6P0N0 1132 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 SCARB1Q8WTV0 552 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 RPL36ALQ969Q0 106 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 CCDC17Q96LX7 622 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 HIST1H2AAQ96QV6 131 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 APOL5Q9BWW9 433 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 PNPLA8Q9NP80 782 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 DDX21Q9NR30 783 aaKnown RBP eCLIP5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 MGAT4CQ9UBM8 478 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 DNAJB11Q9UBS4 358 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 NKX1-2Q9UD57 310 aaPredicted RBP5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 VPS51Q9UID3 782 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 SNX13Q9Y5W8 968 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 RGPD1P0DJD0 1748 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 ABCA3Q99758 1704 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 RREB1Q92766 1687 aa5.5□□□□□ -1.53
SMARCC1-207ENST00000485833 WDR17Q8IZU2 1322 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 USP32Q8NFA0 1604 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 NRAPQ86VF7 1730 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 CYP2D7A0A087X1C5 515 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 A8MVJ9 347 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 TP73O15350 636 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 A1BGP04217 495 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 SFPQP23246 707 aaKnown RBP eCLIP5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 MCM5P33992 734 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 ARHGAP25P42331 645 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 COPB1P53618 953 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 DAG1Q14118 895 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 ST3GAL2Q16842 350 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 MANEALQ5VSG8 457 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 SLC2A7Q6PXP3 512 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 ZNF813Q6ZN06 617 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 USP49Q70CQ1 688 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 METTL25Q8N6Q8 603 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 NGDNQ8NEJ9 315 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 MAFAQ8NHW3 353 aaPredicted RBP5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 ZDHHC12Q96GR4 267 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 SELENOOQ9BVL4 669 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 PRSS22Q9GZN4 317 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 STEAP1Q9UHE8 339 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 CORO2BQ9UQ03 480 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 PIK3R4Q99570 1358 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 E9PCH4 1651 aa5.49□□□□□ -1.53
SMARCC1-207ENST00000485833 PTPN23Q9H3S7 1636 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 RHPN2P1A8MT19 583 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 SNX2O60749 519 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 BCAR3O75815 825 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 IL18RAPO95256 599 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 RBL1P28749 1068 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 NTSR1P30989 418 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 ZNF268Q14587 947 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 CLCA4Q14CN2 919 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 LARS2Q15031 903 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 DAZAP2Q15038 168 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 ETFDHQ16134 617 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 TMEM65Q6PI78 240 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 RNF44Q7L0R7 432 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 CNGA4Q8IV77 575 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 C11orf44Q8N8P7 122 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 FAM118BQ9BPY3 351 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 EFHD1Q9BUP0 239 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 TBC1D23Q9NUY8 699 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 GAR1Q9NY12 217 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 KLHL13Q9P2N7 655 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 SCAF8Q9UPN6 1271 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 HPSEQ9Y251 543 aa5.48□□□□□ -1.53
SMARCC1-207ENST00000485833 MYOM1P52179 1685 aa5.47□□□□□ -1.53
SMARCC1-207ENST00000485833 KCNU1A8MYU2 1149 aa5.47□□□□□ -1.53
SMARCC1-207ENST00000485833 H3BNC9 293 aa5.47□□□□□ -1.53
SMARCC1-207ENST00000485833 PQBP1O60828 265 aaKnown RBP5.47□□□□□ -1.53
SMARCC1-207ENST00000485833 KRTAP10-11P60412 298 aa5.47□□□□□ -1.53
SMARCC1-207ENST00000485833 C11orf87Q6NUJ2 197 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms