RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 BCAT1P54687 386 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 GDF10P55107 478 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 JAM2P57087 298 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 TYRO3Q06418 890 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 PDE4CQ08493 712 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 BST2Q10589 180 aaKnown RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 CETN1Q12798 172 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 IFRD2Q12894 506 aaPredicted RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 CLN3Q13286 438 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 RUNX3Q13761 415 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 ELOAQ14241 798 aaKnown RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 KCNJ12Q14500 433 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 PDGFRLQ15198 375 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 KRT31Q15323 416 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 EXOC3L4Q17RC7 722 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 GOLGA7BQ2TAP0 167 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 ZNF528Q3MIS6 628 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 VWA3BQ502W6 1294 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 SGO2Q562F6 1265 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 TMEM196Q5HYL7 178 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 HECTD3Q5T447 861 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 KLHDC7AQ5VTJ3 777 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 FSTL4Q6MZW2 842 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 PMF1Q6P1K2 205 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 DENND1BQ6P3S1 775 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 TMEM270Q6UE05 265 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 GBP6Q6ZN66 633 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 PIGZQ86VD9 579 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 DNAAF5Q86Y56 855 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 MIB1Q86YT6 1006 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 FAM114A1Q8IWE2 563 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 ETFBKMTQ8IXQ9 262 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 FAM217AQ8IXS0 508 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 PPM1KQ8N3J5 372 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 SYNPOQ8N3V7 929 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 RBBP8NLQ8NC74 664 aaPredicted RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 TPCN2Q8NHX9 752 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 ZNF606Q8WXB4 792 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 DDX1Q92499 740 aaKnown RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 OTUB2Q96DC9 234 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 HEXIM2Q96MH2 286 aaKnown RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 SLITRK1Q96PX8 696 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 ERGIC2Q96RQ1 377 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 SYT11Q9BT88 431 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 IER2Q9BTL4 223 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 LINC00597Q9H2U6 94 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 CHRDQ9H2X0 955 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 BRD9Q9H8M2 597 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 ETNK1Q9HBU6 452 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 CD248Q9HCU0 757 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 ZDHHC4Q9NPG8 344 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 RAB6BQ9NRW1 208 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 GKN1Q9NS71 199 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 ANO10Q9NW15 660 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 FANCLQ9NW38 375 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 STOML2Q9UJZ1 356 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 FBXO10Q9UK96 956 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 TSPAN16Q9UKR8 245 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 CLEC4EQ9ULY5 219 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 MAGED2Q9UNF1 606 aaPredicted RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 SIT1Q9Y3P8 196 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 NFE2L3Q9Y4A8 694 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 DAAM1Q9Y4D1 1078 aa6.01□□□□□ -1.45
CUX1-208ENST00000485792 ASCC3Q8N3C0 2202 aaKnown RBP6.01□□□□□ -1.45
CUX1-208ENST00000485792 TMEM131Q92545 1883 aa6□□□□□ -1.45
CUX1-208ENST00000485792 WDFY3Q8IZQ1 3526 aa6□□□□□ -1.45
CUX1-208ENST00000485792 CNOT1A5YKK6 2376 aaKnown RBP6□□□□□ -1.45
CUX1-208ENST00000485792 A0A1W2PQH9 124 aa6□□□□□ -1.45
CUX1-208ENST00000485792 YJEFN3A6XGL0 299 aa6□□□□□ -1.45
CUX1-208ENST00000485792 TMEM229AB2RXF0 380 aa6□□□□□ -1.45
CUX1-208ENST00000485792 CHURC1-FNTBB4DL54 471 aa6□□□□□ -1.45
CUX1-208ENST00000485792 E7ENQ6 273 aa6□□□□□ -1.45
CUX1-208ENST00000485792 SPECC1L-ADORA2AF8WAN1 911 aa6□□□□□ -1.45
CUX1-208ENST00000485792 LEFTY2O00292 366 aa6□□□□□ -1.45
CUX1-208ENST00000485792 TEX33O43247 280 aa6□□□□□ -1.45
CUX1-208ENST00000485792 TLR5O60602 858 aa6□□□□□ -1.45
CUX1-208ENST00000485792 ZBED1O96006 694 aa6□□□□□ -1.45
CUX1-208ENST00000485792 IL2RAP01589 272 aa6□□□□□ -1.45
CUX1-208ENST00000485792 IGLV3-25P01717 112 aa6□□□□□ -1.45
CUX1-208ENST00000485792 IGLV3-27P01718 113 aa6□□□□□ -1.45
CUX1-208ENST00000485792 CYP17A1P05093 508 aa6□□□□□ -1.45
CUX1-208ENST00000485792 BMP2P12643 396 aa6□□□□□ -1.45
CUX1-208ENST00000485792 CHRNB2P17787 502 aa6□□□□□ -1.45
CUX1-208ENST00000485792 HOXA6P31267 233 aa6□□□□□ -1.45
CUX1-208ENST00000485792 GJA4P35212 333 aa6□□□□□ -1.45
CUX1-208ENST00000485792 EIF2DP41214 584 aaKnown RBP6□□□□□ -1.45
CUX1-208ENST00000485792 NBL1P41271 181 aa6□□□□□ -1.45
CUX1-208ENST00000485792 GABRB2P47870 512 aa6□□□□□ -1.45
CUX1-208ENST00000485792 IRAK1P51617 712 aa6□□□□□ -1.45
CUX1-208ENST00000485792 DAOAP59103 153 aa6□□□□□ -1.45
CUX1-208ENST00000485792 MYL5Q02045 173 aa6□□□□□ -1.45
CUX1-208ENST00000485792 NHLH1Q02575 133 aa6□□□□□ -1.45
CUX1-208ENST00000485792 MTF1Q14872 753 aa6□□□□□ -1.45
CUX1-208ENST00000485792 TAF5Q15542 800 aa6□□□□□ -1.45
CUX1-208ENST00000485792 TAF12Q16514 161 aa6□□□□□ -1.45
CUX1-208ENST00000485792 ITPRIPL2Q3MIP1 535 aa6□□□□□ -1.45
CUX1-208ENST00000485792 C6orf118Q5T5N4 469 aa6□□□□□ -1.45
CUX1-208ENST00000485792 CAVIN1Q6NZI2 390 aaKnown RBP6□□□□□ -1.45
CUX1-208ENST00000485792 MSANTD2Q6P1R3 559 aa6□□□□□ -1.45
CUX1-208ENST00000485792 RHBDF2Q6PJF5 856 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms