RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 RIOK1Q9BRS2 568 aaKnown RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 SPXQ9BT56 116 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 SPZ1Q9BXG8 430 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 WNT5BQ9H1J7 359 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 MTG2Q9H4K7 406 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ERVMER34-1Q9H9K5 563 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 SERHLQ9NQF3 203 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 PNPOQ9NVS9 261 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 TUBA8Q9NY65 449 aaPredicted RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 TAS2R3Q9NYW6 316 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 MALT1Q9UDY8 824 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 FTSJ1Q9UET6 329 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 CNOT11Q9UKZ1 510 aaKnown RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 AURKCQ9UQB9 309 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 TONSLQ96HA7 1378 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 PASKQ96RG2 1323 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 BIVM-ERCC5R4GMW8 1640 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 NUDT19A8MXV4 375 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 H3BUI4 141 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 MAPK13O15264 365 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 RNF113AO15541 343 aaKnown RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 SYNCRIPO60506 623 aaKnown RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 PIAS2O75928 621 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 PCDH8O95206 1070 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 MPIG6BO95866 241 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 FTH1P19P0C7X4 201 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 TYRP14679 529 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 PFKLP17858 780 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 IL10P22301 178 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 PTGS1P23219 599 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 CTNNA2P26232 953 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 AKT1P31749 480 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 ALDH9A1P49189 494 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 ITGA8P53708 1063 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 OLR1P78380 273 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 BASP1P80723 227 aaKnown RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 MRPS15P82914 257 aaKnown RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 CDC42EP1Q00587 391 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 CAP1Q01518 475 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 MEF2AQ02078 507 aaPredicted RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 NFATC3Q12968 1075 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 EFR3AQ14156 821 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 RAB39AQ14964 217 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 RBBP5Q15291 538 aaKnown RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 DLGAP5Q15398 846 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 MAPKAPK3Q16644 382 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 TIGD6Q17RP2 521 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 FAM110CQ1W6H9 321 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 SMU1Q2TAY7 513 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 USP39Q53GS9 565 aaKnown RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 KCNT1Q5JUK3 1230 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 BMP8AQ7Z5Y6 402 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 CNTROBQ8N137 903 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 FAM71DQ8N9W8 422 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 GPR156Q8NFN8 814 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 KAT5Q92993 513 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 DACH2Q96NX9 599 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 MTMR9Q96QG7 549 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 CTAGE1Q96RT6 745 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 DMRTA2Q96SC8 542 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 SH3GL3Q99963 347 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 BRIP1Q9BX63 1249 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 ACPTQ9BZG2 426 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 XKR8Q9H6D3 395 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 CNTD2Q9H8S5 307 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 C14orf93Q9H972 538 aaKnown RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 TM7SF3Q9NS93 570 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 RXFP3Q9NSD7 469 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 SNTG1Q9NSN8 517 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 LMBRD1Q9NUN5 540 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 ANO10Q9NW15 660 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 EMC3Q9P0I2 261 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 KCMF1Q9P0J7 381 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 IMPACTQ9P2X3 320 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 MYO1AQ9UBC5 1043 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 FBLN5Q9UBX5 448 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 RGS17Q9UGC6 210 aaPredicted RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 CPSF3Q9UKF6 684 aaKnown RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 NUDT5Q9UKK9 219 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 AGO2Q9UKV8 859 aaKnown RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 PALD1Q9ULE6 856 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 CCPG1Q9ULG6 757 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 RIMKLBQ9ULI2 386 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 USP18Q9UMW8 372 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 CHTOPQ9Y3Y2 248 aaKnown RBP4.76□□□□□ -1.65
RTN4-213ENST00000485749 ATP6V1DQ9Y5K8 247 aa4.76□□□□□ -1.65
RTN4-213ENST00000485749 A0A0U1RQK1 487 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 RNF103-CHMP3A0A140T963 221 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 A0A1W2PQJ5 194 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 ZNF320A2RRD8 509 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 NOTOA8MTQ0 251 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PSMD9O00233 223 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 RNF103O00237 685 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 SCAMP1O15126 338 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 SRGAP3O43295 1099 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 BUB1O43683 1085 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 TSPAN1O60635 241 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 EXOC3O60645 756 aa4.75□□□□□ -1.65
RTN4-213ENST00000485749 PHF2O75151 1096 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms