RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.37□□□□□ -0.43
APTX-227ENST00000485479 SNX10Q9Y5X0 201 aa12.37□□□□□ -0.43
APTX-227ENST00000485479 PIAS3Q9Y6X2 628 aa12.37□□□□□ -0.43
APTX-227ENST00000485479 DMDP11532 3685 aa12.37□□□□□ -0.43
APTX-227ENST00000485479 ATG2BQ96BY7 2078 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 F5P12259 2224 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 SHISA7A6NL88 538 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 SOBPA7XYQ1 873 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 I6L893 689 aaPredicted RBP12.36□□□□□ -0.43
APTX-227ENST00000485479 TRIM24O15164 1050 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 IRAK2O43187 625 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 RTN2O75298 545 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 CYP17A1P05093 508 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 PDGFRAP16234 1089 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 PFKLP17858 780 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 SGSHP51688 502 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 KPNA1P52294 538 aaPredicted RBP12.36□□□□□ -0.43
APTX-227ENST00000485479 SNX16P57768 344 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 COG7P83436 770 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 MAMLD1Q13495 774 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 RUNX3Q13761 415 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 SLC18A3Q16572 532 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 ARHGAP29Q52LW3 1261 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 LY6G5CQ5SRR4 150 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 Q6ZNB5 142 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 FAM131BQ86XD5 332 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 TMEM25Q86YD3 366 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 ZDHHC17Q8IUH5 632 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 SFTPA1Q8IWL2 248 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 EDAQ92838 391 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 RNF34Q969K3 372 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 E2F7Q96AV8 911 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 CCDC42Q96M95 316 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 SERPINB11Q96P15 392 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 CDK5RAP1Q96SZ6 601 aaKnown RBP12.36□□□□□ -0.43
APTX-227ENST00000485479 MAGEB5Q9BZ81 275 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 ISCUQ9H1K1 167 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 ECT2Q9H8V3 914 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 ARHGEF3Q9NR81 526 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 MTF2Q9Y483 593 aaPredicted RBP12.36□□□□□ -0.43
APTX-227ENST00000485479 C2CD4BA6NLJ0 364 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 STK25O00506 426 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 IGLV3-25P01717 112 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 CDC25BP30305 580 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 SLC6A4P31645 630 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 NOS2P35228 1153 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 GALCP54803 685 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 CDK17Q00537 523 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 TRIP4Q15650 581 aaPredicted RBP12.36□□□□□ -0.43
APTX-227ENST00000485479 ANO4Q32M45 955 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 CCDC14Q49A88 953 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 SLC44A4Q53GD3 710 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 NADSYN1Q6IA69 706 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 DCUN1D2Q6PH85 259 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 RHBDF2Q6PJF5 856 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 ADGRG2Q8IZP9 1017 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 NPY6RQ99463 290 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 FBRSL1Q9HCM7 1045 aaKnown RBP12.36□□□□□ -0.43
APTX-227ENST00000485479 C11orf16Q9NQ32 467 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 SLC2A4RGQ9NR83 387 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 ASNSD1Q9NWL6 643 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 LSM7Q9UK45 103 aaKnown RBP12.36□□□□□ -0.43
APTX-227ENST00000485479 NENFQ9UMX5 172 aa12.36□□□□□ -0.43
APTX-227ENST00000485479 NDRG2Q9UN36 371 aaKnown RBP12.36□□□□□ -0.43
APTX-227ENST00000485479 E2F8A0AVK6 867 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 PI4K2BG5E9Z4 385 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 CCP110O43303 1012 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 IGLV3-27P01718 113 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 GLI1P08151 1106 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 GZMAP12544 262 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 HARS2P49590 506 aaKnown RBP12.35□□□□□ -0.43
APTX-227ENST00000485479 SIGLEC14Q08ET2 396 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 ZNF252P-AS1Q0IIN9 211 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 DHCR24Q15392 516 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 PPP1R15BQ5SWA1 713 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 TRIM67Q6ZTA4 783 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 HTR3DQ70Z44 454 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 DDX42Q86XP3 938 aaKnown RBP eCLIP12.35□□□□□ -0.43
APTX-227ENST00000485479 CPNE8Q86YQ8 564 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 UBALD2Q8IYN6 164 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 ZNF276Q8N554 614 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 ATP2A3Q93084 1043 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 TLR6Q9Y2C9 796 aa12.35□□□□□ -0.43
APTX-227ENST00000485479 SSU72P8A0A1W2PR75 194 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 SIGLEC16A6NMB1 481 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 TCF3P15923 654 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 CTHP32929 405 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 GJA4P35212 333 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 SLC6A11P48066 632 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 DEUP1Q05D60 604 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 EIF4EBP2Q13542 120 aaPredicted RBP12.34□□□□□ -0.43
APTX-227ENST00000485479 PON2Q15165 354 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 MLF2Q15773 248 aaPredicted RBP12.34□□□□□ -0.43
APTX-227ENST00000485479 GAB4Q2WGN9 574 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 ITPRIPL2Q3MIP1 535 aa12.34□□□□□ -0.43
APTX-227ENST00000485479 SLC25A52Q3SY17 297 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms