RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	SLC16A3	O15427	465 aa	Known RBP	13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	ZNF217	O75362	1048 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	STC2	O76061	302 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	HOXD12	P35452	270 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	ATXN3	P54252	364 aa	Predicted RBP	13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	RPL6	Q02878	288 aa	Known RBP	13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	E2F5	Q15329	346 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	EGFLAM	Q63HQ2	1017 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	KDF1	Q8NAX2	398 aa	Predicted RBP	13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	SLC4A11	Q8NBS3	891 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	SEMA4D	Q92854	862 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	LRRC4	Q9HBW1	653 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	FSCN3	Q9NQT6	498 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	PLK2	Q9NYY3	685 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	CLIC5	Q9NZA1	410 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	MARK1	Q9P0L2	795 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	STARD13	Q9Y3M8	1113 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	GTF3C3	Q9Y5Q9	886 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424	DOCK9	Q9BZ29	2069 aa		13.9	□□□□□ -0.18
UBA3-210	ENST00000485424		A0A1W2PQF6	199 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	SLC12A8	A0AV02	714 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	PSMA7	O14818	248 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	GREM1	O60565	184 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	NDUFS2	O75306	463 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	CFI	P05156	583 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	CD19	P15391	556 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	CORO1A	P31146	461 aa	Known RBP	13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	BCAT1	P54687	386 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	RAD23B	P54727	409 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	YWHAG	P61981	247 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	NUCB2	P80303	420 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	ARID5A	Q03989	594 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	STARD3	Q14849	445 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	GOLGA7B	Q2TAP0	167 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	SGO2	Q562F6	1265 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	ARHGAP17	Q68EM7	881 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	KIAA1211L	Q6NV74	962 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	PIP4P1	Q86T03	277 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	PIGZ	Q86VD9	579 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	ZNF276	Q8N554	614 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	IPO4	Q8TEX9	1081 aa	Known RBP	13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	RNF139	Q8WU17	664 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	TATDN2	Q93075	761 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	ERLEC1	Q96DZ1	483 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	IPO9	Q96P70	1041 aa	Known RBP	13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	UBXN6	Q9BZV1	441 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	CD248	Q9HCU0	757 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	OLA1	Q9NTK5	396 aa	Known RBP	13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	MARCH2	Q9P0N8	246 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	USP3	Q9Y6I4	520 aa		13.89	□□□□□ -0.19
UBA3-210	ENST00000485424	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	TMEM8B	A6NDV4	472 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	NDUFV2	P19404	249 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	TBXAS1	P24557	533 aa	Predicted RBP	13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	PPP1R2	P41236	205 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	TKTL1	P51854	596 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	LRRC63	Q05C16	580 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	BST2	Q10589	180 aa	Known RBP	13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	CETN1	Q12798	172 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	SEMA3B	Q13214	749 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	CUL2	Q13617	745 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	DUOXA1	Q1HG43	343 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	CCDC40	Q4G0X9	1142 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	CBWD6	Q4V339	395 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	CBWD3	Q5JTY5	395 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	CBWD5	Q5RIA9	395 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	ANKRD40	Q6AI12	368 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.88	□□□□□ -0.19
UBA3-210	ENST00000485424		Q6ZNB5	142 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	TOGARAM2	Q6ZUX3	1019 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	RABEPK	Q7Z6M1	372 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	SCD5	Q86SK9	330 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	DENND1C	Q8IV53	801 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	SIX6OS1	Q8N1H7	587 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	DEFB119	Q8N690	84 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	ANKRD52	Q8NB46	1076 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	CEP76	Q8TAP6	659 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	DDI1	Q8WTU0	396 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	ACOX2	Q99424	681 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	ARID3A	Q99856	593 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	SLC32A1	Q9H598	525 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	CAPN10	Q9HC96	672 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	METTL14	Q9HCE5	456 aa	Known RBP	13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	SLC6A14	Q9UN76	642 aa		13.88	□□□□□ -0.19
UBA3-210	ENST00000485424	APC2	O95996	2303 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	SHROOM3	Q8TF72	1996 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	SPAAR	A0A1B0GVQ0	90 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	UPK3BL1	B0FP48	263 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	PRRT4	C9JH25	899 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	UPK3BL2	E5RIL1	263 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	GFRA2	O00451	464 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	XPO1	O14980	1071 aa	Known RBP	13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	HYAL3	O43820	417 aa	Predicted RBP	13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	ZBED1	O96006	694 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	SERPINF2	P08697	491 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	HARS2	P49590	506 aa	Known RBP	13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	ZNF33A	Q06730	810 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	LRMP	Q12912	555 aa		13.87	□□□□□ -0.19

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