RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 UCMAQ8WVF2 138 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 TOE1Q96GM8 510 aaKnown RBP13.68□□□□□ -0.22
HDAC6-227ENST00000485102 CAMK1GQ96NX5 476 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 SLC2A11Q9BYW1 496 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 DNAI2Q9GZS0 605 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 SLC6A17Q9H1V8 727 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 PLK2Q9NYY3 685 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 APOBEC2Q9Y235 224 aaKnown RBP13.68□□□□□ -0.22
HDAC6-227ENST00000485102 FRMD4BQ9Y2L6 1034 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 CELSR3Q9NYQ7 3312 aa13.68□□□□□ -0.22
HDAC6-227ENST00000485102 ADAMTS20P59510 1910 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 MDM4O15151 490 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 ACTN4O43707 911 aaKnown RBP13.67□□□□□ -0.22
HDAC6-227ENST00000485102 DKK1O94907 266 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 NCAM1P13591 858 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 MAOBP27338 520 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 IL12RB1P42701 662 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 ACAP1Q15027 740 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 GEN1Q17RS7 908 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 IL27RAQ6UWB1 636 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 KIAA1324Q6UXG2 1013 aaKnown RBP13.67□□□□□ -0.22
HDAC6-227ENST00000485102 TMPRSS6Q8IU80 811 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 FAM217AQ8IXS0 508 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 TTC39CQ8N584 583 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 NUP58Q9BVL2 599 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 IMPG2Q9BZV3 1241 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 EXOC1Q9NV70 894 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 ELOVL2Q9NXB9 296 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 DKK4Q9UBT3 224 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 NAGPAQ9UK23 515 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 NUDT5Q9UKK9 219 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 PCOLCE2Q9UKZ9 415 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 GPSM3Q9Y4H4 160 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 PCDHGB2Q9Y5G2 931 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 NUMA1Q14980 2115 aa13.67□□□□□ -0.22
HDAC6-227ENST00000485102 PTPRBP23467 1997 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 KCNJ18B7U540 433 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 BCAT2O15382 392 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-227ENST00000485102 CLSTN1O94985 981 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 PIK3CAP42336 1068 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 ME1P48163 572 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 TPMTP51580 245 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 VAMP7P51809 220 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 COPAP53621 1224 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 PDE4CQ08493 712 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 SCAPQ12770 1279 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 KMT5BQ4FZB7 885 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 RAB41Q5JT25 222 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 INTS8Q75QN2 995 aaKnown RBP13.66□□□□□ -0.22
HDAC6-227ENST00000485102 ANKS1BQ7Z6G8 1248 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 ARHGAP18Q8N392 663 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 BAHD1Q8TBE0 780 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-227ENST00000485102 SIPA1Q96FS4 1042 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 PAGE5Q96GU1 130 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 GPR174Q9BXC1 333 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 NIF3L1Q9GZT8 377 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 APOBEC3GQ9HC16 384 aaKnown RBP13.66□□□□□ -0.22
HDAC6-227ENST00000485102 OSGEPQ9NPF4 335 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 USP25Q9UHP3 1055 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 SERTAD1Q9UHV2 236 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 RCOR1Q9UKL0 485 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
HDAC6-227ENST00000485102 SMG1Q96Q15 3661 aaKnown RBP13.65□□□□□ -0.22
HDAC6-227ENST00000485102 CALUO43852 315 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-227ENST00000485102 SYNCRIPO60506 623 aaKnown RBP13.65□□□□□ -0.22
HDAC6-227ENST00000485102 KIF20AO95235 890 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 CER1O95813 267 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 CYBBP04839 570 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 ZSCAN22P10073 491 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-227ENST00000485102 CORO1AP31146 461 aaKnown RBP13.65□□□□□ -0.22
HDAC6-227ENST00000485102 GTF2H1P32780 548 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 ZNF234Q14588 700 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 PPP1R26Q5T8A7 1209 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-227ENST00000485102 SLCO6A1Q86UG4 719 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 GRAMD1CQ8IYS0 662 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 TAS1R2Q8TE23 839 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 PRCCQ92733 491 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-227ENST00000485102 BHMTQ93088 406 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 CDC6Q99741 560 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
HDAC6-227ENST00000485102 AGO1Q9UL18 857 aaKnown RBP13.65□□□□□ -0.22
HDAC6-227ENST00000485102 MEI4A8MW99 385 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 F13A1P00488 732 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 MATKP42679 507 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 ZNF445P59923 1031 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 BNC1Q01954 994 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 PPP3CAQ08209 521 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 CAMK2GQ13555 558 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-227ENST00000485102 DCAF12L1Q5VU92 463 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 CEP135Q66GS9 1140 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 ARHGAP17Q68EM7 881 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 PM20D1Q6GTS8 502 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 TMPRSS7Q7RTY8 843 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 ZCCHC9Q8N567 271 aaKnown RBP13.64□□□□□ -0.23
HDAC6-227ENST00000485102 PNPLA1Q8N8W4 532 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 JAKMIP2Q96AA8 810 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 CCDC86Q9H6F5 360 aaKnown RBP13.64□□□□□ -0.23
HDAC6-227ENST00000485102 GAREM1Q9H706 876 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 TM7SF3Q9NS93 570 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 MARCH2Q9P0N8 246 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms